Table 1.
ORF | Protein | Nucleotide position (bp) | Protein length (aa) | Predicted M.W. (kDa) |
---|---|---|---|---|
ORF1a | 1a polyprotein | 225–5399 | 1725 | 190 |
ORF1b | – | 5405–9751 | – | – |
ORF1ab | 1ab polyprotein | 225–9751 | 3176 | 349.3 |
nsp1 | 255–1004 | 260 | 28.6 | |
nsp2 | 1005–2717 | 571 | 61.4 | |
nsp3 | 2718–3416 | 233 | 25 | |
nsp4 | 3417–4028 | 204 | 21 | |
nsp5 | 4029–4514 | 162 | 18.1 | |
nsp6 | 4515–4580 | 22 | 2.3 | |
nsp7 | 4581–5255 | 225 | 25.2 | |
nsp8 | 5256–5405 | 50 | 5.5 | |
nsp9 | 5256–7333 | 693 | 76.8 | |
nsp10 | 7334–8734 | 467 | 50.5 | |
nsp11 | 8735–9391 | 219 | 24.2 | |
nsp12 | 9392–9748 | 119 | 12.5 | |
ORF2a | E | 9751–9954 | 67 | 7.4 |
ORF2b | GP2 | 9824–10,507 | 227 | 25.0 |
ORF3 | GP3 | 10,306–10,797 | 163 | 17.9 |
ORF4 | GP4 | 10,700–11,158 | 142 | 15.6 |
ORF5a | ORF5a | 11,112–11,291 | 59 | 6.5 |
ORF5b | GP5 | 11,146–11,913 | 255 | 28.0 |
ORF6 | M | 11,901–12,389 | 162 | 17.8 |
ORF7 | N | 12,313–12,645 | 110 | 12.1 |
Based on EAV VBS (ATCC VR-796) published sequence (GenBank accession number DQ846750).