Table 3.

Amino acid and nucleotide identity of the various capsid domains of the South Korean unclassified bovine calicivirus strains to the Bo/Newbury1/1976/UK and Bo/NB/1980/US

Virus	Amino acid [nucleotide] identity of capsid genea
	Bo/Newbury 1/1976/UK								Bo/NB/1980/US
	Complete	S-domain	P1A-domain	P2-domain	P1B-domain	P-domain	Complete	S-domain	P1A-domain	P2-domain	P1B-domain	P-domain
Bo/MA39/KOR	92.3 [86.1]	97.7 [93.4]	92.9 [88.7]	82.2 [75.9]	97.1 [85.4]	88.7 [81.1]	92.9 [87.0]	98.2 [93.2]	92.9 [89.9]	83.4 [76.9]	97.1 [88.3]	89.3 [82.7]
Bo/SA63/KOR	93.3 [86.7]	98.2 [94.0]	98.2 [88.7]	82.8 [76.7]	97.1 [85.8]	89.9 [81.6]	93.8 [87.6]	98.6 [93.5]	98.2 [89.9]	84.0 [78.1]	97.1 [89.3]	90.5 [83.6]
Bo/MA271/KOR	93.1 [86.5]	98.6 [94.0]	98.2 [88.7]	81.7 [76.3]	97.1 [85.8]	89.3 [81.4]	93.6 [87.5]	99.1 [93.5]	98.2 [89.9]	82.8 [77.7]	97.1 [89.3]	99.9 [83.4]
Bo/MA274/KOR	92.7 [85.7]	98.2 [93.1]	98.2 [86.9]	81.7 [75.3]	96.1 [85.8]	89.0 [80.6]	93.1 [86.9]	98.6 [92.9]	98.2 [88.1]	82.2 [77.5]	96.1 [88.7]	89.3 [82.8]
Bo/MA278/KOR	93.1 [86.2]	98.2 [93.4]	98.2 [88.1]	82.2 [76.2]	96.1 [85.4]	89.3 [81.2]	93.6 [87.4]	98.6 [93.9]	98.2 [89.3]	83.4 [77.8]	96.1 [88.3]	99.9 [83.1]
Bo/MA298/KOR	93.3 [86.1]	98.6 [93.2]	98.2 [88.1]	82.8 [76.1]	96.1 [85.4]	99.6 [81.1]	93.8 [87.3]	99.1 [93.7]	98.2 [89.3]	84.0 [77.5]	96.1 [88.3]	90.2 [82.9]
Bo/MA362/KOR	93.3 [86.1]	98.6 [93.4]	98.2 [88.7]	82.8 [76.1]	96.1 [85.0]	99.6 [81.1]	93.6 [87.2]	99.1 [93.2]	98.2 [89.9]	83.4 [77.5]	96.1 [88.6]	99.9 [83.1]
Bo/MA415/KOR	93.3 [86.3]	98.6 [93.7]	98.2 [88.1]	82.8 [76.3]	96.1 [85.4]	99.6 [81.2]	93.8 [87.3]	99.1 [93.5]	98.2 [89.3]	84.0 [77.7]	96.1 [88.3]	90.2 [83.0]
Bo/MA474/KOR	93.3 [85.9]	98.6 [93.2]	98.2 [88.1]	82.8 [75.7]	96.1 [85.4]	99.6 [80.9]	93.8 [87.0]	99.1 [93.1]	98.2 [89.3]	84.0 [77.5]	96.1 [88.3]	90.2 [82.9]
Bo/MA567-1/KOR	92.9 [86.3]	97.7 [93.4]	98.2 [88.7]	82.2 [76.3]	97.1 [85.8]	99.6 [81.4]	93.4 [87.4]	98.2 [93.2]	98.2 [89.9]	83.4 [77.7]	97.1 [89.3]	90.2 [83.4]
Bo/MA567-2/KOR	92.7 [86.2]	98.2 [93.5]	96.4 [88.1]	81.7 [76.1]	97.1 [85.8]	89.0 [81.2]	93.3 [87.3]	98.6 [93.4]	96.4 [89.3]	82.8 [77.5]	97.1?? [89.3]	99.6 [83.2]
Bo/MA729/KOR	92.3 [85.8]	97.7 [93.1]	98.2 [88.7]	81.7 [75.5]	95.1 [84.8]	88.7 [80.7]	92.9 [86.8]	98.2 [92.9]	98.2 [89.9]	82.8 [77.3]	95.1 [87.7]	89.3 [82.7]

^aEach domain is based on the amino acid and nucleotide sequences of S (1-217 nt and 1-651 aa), P1A (218–273 nt and 652–819 aa), P2 (274–442 nt and 820–1326 aa) and P1B (443–545 nt and 1327–1635 aa) domains for the Parkville virus (PV; genus Sapovirus) capsid protein, as determined by X-ray crystallography (Chen et al., 2004).