Table 2.
Strain | Genotype (Homology to RVA/Cow-wt/Tottori-SG/2013/G15P[14] (%)) |
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---|---|---|---|---|---|---|---|---|---|---|---|
VP7 | VP4 | VP6 | VP1 | VP2 | VP3 | NSP1 | NSP2 | NSP3 | NSP4 | NSP5 | |
RVA/Cow-wt/JPN/Tottori-SG/2013/G15P[14] | G15 (100) | P[14] (100) | I2 (100) | R2 (100) | C2 (100) | M2 (100) | A3 (100) | N2 (100) | T6 (100) | E2 (100) | H3 (100) |
Japanese bovine strains | |||||||||||
RVA/Cow-tc/JPN/Sun9/2000/G8P[14] | G8 (72.0) | P[14] (95.8) | I2 (88.4) | R2 (96.0) | C2 (92.2) | M2 (94.1) | |||||
RVA/Cow-wt/JPN/AzuK-1/2006/G21P[29] | G21 (71.6) | P[29] (64.7) | I2 (96.0) | R2 (96.4) | C2 (93.1) | M2 (96.9) | A13 (74.4) | N2 (89.4) | T9 (77.6) | E2 (94.5) | H3 (97.1) |
RVA/Cow-wt/JPN/Dai-10/2008/G24P[33] | G24 (70.6) | P[33] (67.6) | I2 (96.6) | R2 (94.9) | C2 (92.2) | M2 (92.7) | A13 (73.0) | N2 (96.7) | T9 (78.1) | E2 (96.2) | H3 (97.0) |
RVA/Cow-tc/JPN/BRV105/1983/G6P[1] | G6 (71.8) | P[1] (67.7) | I2 (87.7) | R2 (97.1) | C2 (93.2) | M2 (92.6) | A3 (92.9) | N2 (86.4) | T6 (96.0) | E2 (96.8) | H3 (97.5) |
non-Japanese bovine strains | |||||||||||
RVA/Cow-tc/USA/NCDV/1967/G6P[1] | G6 (73.6) | P[1] (67.7) | I2 (88.3) | R2 (95.8) | C2 (93.2) | M2 (92.8) | A3 (93.2) | N2 (86.6) | T6 (95.7) | E2 (96.4) | H3 (98.3) |
RVA/Cow-tc/FRA/RF/1975/G6P[1] | G6 (73.7) | P[1] (67.6) | I2 (88.2) | R2 (97.2) | C2 (93.1) | M2 (92.8) | A3 (93.1) | N2 (86.6) | T6 (96.1) | E2 (97.2) | H3 (97.4) |
RVA/Cow-tc/UK/1973/G6P[5] | G6 (74.2) | P[5] (65.3) | I2 (88.8) | R2 (92.5) | C2 (92.6) | M2 (93.1) | A3 (87.8) | N2 (87.4) | T7 (83.0) | E2 (90.6) | H3 (93.1) |
RVA/Cow-tc/USA/WC3/1981/G6P[5] | G6 (73.4) | P[5] (64.9) | I2 (88.3) | R2 (96.9) | C2 (93.0) | M2 (94.3) | A3 (92.8) | N2 (88.0) | T6 (95.7) | E2 (92.0) | H3 (97.4) |
RVA/Cow-wt/ARG/B383/1998/G15P[11] | G15 (89.9) | P[11] (60.2) | I2 (85.5) | R5 (80.7) | C2 (84.1) | M2 (85.9) | A13 (73.8) | N2 (87.7) | T6 (88.1) | E12 (87.5) | H3 (97.7) |
An open space means the sequence data could not be available.