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. 2019 Aug 12;47:101435. doi: 10.1016/j.mcp.2019.101435

Table 1.

Primers used in this study.

Viruses Primer ID Sequences (5′–3′) Reference Product size
PEDV PEDV-N-Fa ATGGCTTCTGTCAGCTTTCA GenBank
DQ355221.1
1326 bp
PEDV-N-Ra TTAATTTCCTGTATCGAAGATCTCG
PEDV-DPO-Fb GGTATTGGAGAAAATCCTGACAGGIIIIIdGCAACAGCA 251 bp
PEDV-DPO-Rb GACGCATCAACACCTTTTTCGIIIIITTCCGCATC
PEDV-C-Fc GGTATTGGAGAAAATCCTGACAGGCATAAGCAACAGCA 251 bp
PEDV-C-Rc GACGCATCAACACCTTTTTCGACAAATTCCGCATC
TGEV TGEV-N-Fa ATGGCCAACCAGGGACAA GenBank
KU729220.1
1149 bp
TGEV-N-Ra TTAGTTCGTTACCTCATCAATTATC
TGEV-DPO-Fb CTGTTCTTGCCGCACTTAAAAIIIIIGGTGTTGAC 180 bp
TGEV-DPO-Rb TAGCTCCATAAAATCTTGTCACATCIIIIITACCTGCAG
TGEV-C-Fc CTGTTCTTGCCGCACTTAAAAAGTTAGGTGTTGAC 180 bp
TGEV-C-Rc TAGCTCCATAAAATCTTGTCACATCACCTTTACCTGCA
PoRV PoRV-VP7-Fa ATGTATGGTATTGAATATACCACAG GenBank
JN388691.1
981 bp
PoRV-VP7-Ra CTAGACTCGGTAATAAAAGGCAG
PoRV-DPO-Fb TGTTTTTAACAAAAGGATIIIIIACAGGGTCA 318 bp
PoRV-DPO-Rb CTGTAGTCGAACATCCTAIIIIIAGAGTCTGC
PoRV-C-Fc TGTTTTTAACAAAAGGATGGCCAACAGGGTCA 318 bp
PoRV-C-Rc CTGTAGTCGAACATCCTATCCCGAGAGTCTGC
PDCoV PDCoV-N-Fa ATGGCCGCACCAGTAGTCCCTA GenBank
MH715491.1
1029 bp
PDCoV-N-Ra CTACGCTGCTGATTCCTGCTTT
PDCoV-DPO-Fb AGGCTACTCATCCTCAGTTTCGTGGIIIIIGAGTTCCGC 400 bp
PDCoV-DPO-Rb GGGCCACTTACACGCTCCTGAGGTCIIIIICTAGCGTTG
PDCoV-C-Fc AGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGC 400 bp
PDCoV-C-Rc GGGCCACTTACACGCTCCTGAGGTCTTCCTCTAGCGTTG
a

Primers were used to amplify the full-length of the target gene for positive standard control.

b

DPO primers were used to establish detection method.

c

Conventional primers were used as control for comparison with DPO primers.

d

“I” means deoxyinosine.