Table 2.
Phylogenetic breakdown, accession number, GC3S and the first two axis values in CA of 11 selected viruses in order Nidoviralesa, b
Organisma | Accession number | GC3S(%) | f1′b | f2′b | ||||
Coronavirus | ||||||||
HCoV 229E | NC_002645 | 30.89 | −0.84 | −0.16 | ||||
PEDV | NC_003436 | 37.32 | −0.04 | 0.42 | ||||
TGV | NC_002306 | 27.02 | −0.99 | −0.08 | ||||
BCoV | NC_003045 | 29.43 | −0.75 | 0.48 | ||||
MHV | NC_001846 | 38.30 | −0.16 | 0.27 | ||||
AIBV | NC_001451 | 26.09 | −0.90 | −1.30 | ||||
SARSCoV | NC_004718 | 37.23 | 0.05 | 0.36 | ||||
Arterivirus | ||||||||
EAV | NC_002532 | 47.28 | 0.80 | 0.47 | ||||
LDEV | NC_002534 | 45.18 | 0.53 | 0.43 | ||||
PRRSV | NC_001961 | 53.76 | 1.31 | 0.55 | ||||
SHFV | NC_003092 | 48.43 | 1.09 | −0.14 |
Organism abbreviation: HCoV 229E, human Coronavirus 229E; PEDV, porcine epidemic diarrhea virus; TGV, transmissible gastroenteritis virus; BCoV, bovine Coronavirus; MHV, murine hepatitis virus; AIBV, avian infectious bronchitis virus; SARSCoV, SARS Coronavirus; EAV, equine arteritis virus; LDEV, lactate dehydrogenase elevating virus; PRRSV, porcine reproductive and respiratory syndrome virus; SHFV, simian hemorrhagic fever virus.
f1′ and f2′, respectively, represent the first axis mean value and the second axis mean value in CA of each genome.