Table 2.
Structures and inhibitory activity of a set of non-peptidyl compounds (group II) based on the chemical structure of MAC-5576
| No. | Compound | IC50 (nM) | ΔGa (kcal/mol) | Dc–sb (2A5K) (Å) | Dc–sc (1UK4) (Å) |
|---|---|---|---|---|---|
| 6 | ![]() |
164 | −6.92 | 4.50 | 3.03 |
| 7 | ![]() |
697 | −6.93 | 4.49 | 3.02 |
| 8 | ![]() |
434 | −7.49 | 4.45 | 3.01 |
| 9 | ![]() |
333 | −6.79 | 4.43 | 3.10 |
| 10 | ![]() |
684 | −7.23 | 4.60 | 3.15 |
| 11 | ![]() |
124 | −8.41 | 4.14 | 2.85 |
| 12 | ![]() |
108 | −8.58 | 3.74 | 3.38 |
The binding free energies predicted in the Cys–S1 binding mode.
Distances between the carbonyl carbon of the acyclic ester bond and the sulfur atom of Cys145 (PDB 2A5K) in the Cys–S1 binding mode.
Distances between the carbonyl carbon of the acyclic ester bond and the sulfur atom of Cys145 (PDB 1UK4) in the Cys–S1 binding mode.






