Table 3.
The parameters used in the p53-MDM2 feedback regulatory loop.
Parameters | Description | Constant |
---|---|---|
SP53 | Basal induction rate of p53 mRNA | 0.01 |
Smdm2 | Basal induction rate of MDM2 mRNA | 0.002 |
krp | Translation rate of p53 mRNA | 0.12 |
Dephosphorylation rate of p53∗ | 0.2 | |
ATM∗-dependent phosphorylation rate of p53 | 0.6 | |
kmp | Mdm2-dependent degradation rate of p53 | 0.1 |
p53-dependent Mdm2 transcription rate | 0.03 | |
Mdm2-dependent degradation rate of p53∗ | 0.02 | |
kmat | ATM∗-dependent degradation rate of Mdm2 | 0.01 |
kmrp | Translation rate of Mdm2 mRNA | 0.02 |
drp | Degradation rate of p53 mRNA | 0.02 |
dpp | Basal degradation rate of p53 | 0.02 |
Basal degradation rate of p53∗ | 0.008 | |
dmr | Degradation rate of Mdm2 mRNA | 0.01 |
dmp | Basal degradation rate of Mdm2 | 0.003 |
kp | Michaelis constant of ATM-dependent p53 phosphorylation | 1.0 |
k | Michaelis constant of p53-dependent Mdm2 transcription | 1.0 |
kd | Threshold for Mdm2-dependent p53 degradation | 0.03 |
n | Hill coefficient of the Mdm2 transcription rate | 4 |
kat | Threshold of ATM-dependent Mdm2 degradation | 1.60 |
Threshold of Mdm2-dependent p53∗ degradation | 0.32 |