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MAFFT considers similarities in forward strands (red) only, but ignores similarities in reverse strands (blue), Plot 1/2: alignment MT066175.1 + MT039873.1 99.7%, plot 1/3: MT066175.1+ MN997409.1 99.7%, plot 1/4: MT066175.1 + MN996532.1 89%, plot 1/5: MT066175.1 + EU371564.1 82.4%, plot 1/6: MT066175.1 + KY938558.1 = 68%, plot 1/7: MT066175.1 + MN985325.1 95%.
