Table 1.
Influenza A virus with highest nucleotide sequence identity to A/Ontario/N163578/2012 influenza virus (HINIv) isolated in Ontario as determined by a blast search in GenBank.
| Gene segment | Nucleotide sequence identity (%) | Subtype | Virus with the highest identity | |
|---|---|---|---|---|
| 1 | PB2 | 98.90 | H1N1 | A/swine/Illinois/A00857129/2011 |
| 2 | PB1 | 99.26 | H3N2 | A/swine/Illinois/A00857318a/2012a |
| 3 | PA | 99.35 | H3N2 | A/swine/Illinois/A00857318a/2012a |
| 4 | HA | 99.24 | H1N1 | A/swine/South Dakota/7/2011 |
| 5 | NP | 99.20 | H3N2 | A/swine/Indiana/A01049091/2010 |
| 6 | NA | 98.92 | H1N1 | A/swine/Minnesota/A01134524/2011 |
| 7 | M | 99.49 | H3N2 | A/swine/Illinois/A00857318a/2012a |
| 8 | NS | 99.64 | H3N2 | A/swine/Illinois/A00857318a/2012a |
a
Triple-reassortant virus (trH3N2) containing M and NP genes of pandemic H1N1.