Table 1.
Oligonucleotide primers and amplification conditions used in this study
| Primer name | Sequence (5′–3′) | Purpose | Thermal cycling condition |
|---|---|---|---|
| RBGAPDH1 FW | AGTCGCAAGACAGACTGAGGC | RT-PCR isolation of ORF sequence | 30 Cycles of 94 °C for 45 s, 60 °C for 45 s, 72 °C for 1.5 min, with an initial denaturation at 94 °C for 4 min |
| RBGAPDH1 RV | ATTCCACCACTGACTGCAGTAC | ||
| RBGAPDH2 FW | CATCAGCCGTGAGGTAACTCT | ||
| RBGAPDH2 RV | AAGCGGAGTTACAGTAGCTCTG | ||
| RBGAPDH1-1F | TAAACCAACCAGCCAATCGAC | Real-time RT-PCR assay | 40 Cycles of 94 °C for 20 s, 58 °C for 20 s, 72 °C for 30 s, with an initial denaturation at 94 °C for 3 min |
| RBGAPDH1-1R | CAGACAAAGAGTCTCACACC | ||
| RBGAPDH2-1F | GTCTGTCCAAGCCTGCATCT | ||
| RBGAPDH2-1R | GTGTAGTAGAGCTAAGGGGT | ||
| qRB18S 1F | TACCACATCCAAGGAAGGCA | ||
| qRB18S 1R | TTCCTAGCTGCGGTATTCAG | ||
| RB18S RV | AGAATTTCACCTCTAGCGGC | Preparation of 18S rRNA template during reverse transcription | |