Table 2.
BCR–FGFR1 fusions detected by RNA-seq
| Case # | Left gene | Left chromosome | Left position | Right gene | Right chromosome | Right position | # of spanning mate pairs | # of mate pairs one end only spanning | Strand info | Left flanking sequence | Right flanking sequence |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | BCR | 8 | 38275890 | FGFR1 | 22 | 23603726 | 9 | 45 | fr | TGCAGCAGTGG AGCCACCAG CAGCGGGTG GGCGACCTCTT CCAGAAGCTG | GTGTCTGCTGA CTCCAGTGCA TCCATGAACT CTGGGGTTC TTCTGGTTCG |
| 2 | BCR | 8 | 38275891 | FGFR1 | 22 | 23603727 | 107 | 15 | fr | GTGCAGCAGTG GAGCCACCAG CAGCGGGTGG GCGACCTCTTC CAGAAGCTG | GTGTCTGCTGAC TCCAGTGCATC CATGAACTCTG GGGTTCTTCTG GTTCGG |