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. 2020 Mar 25;16(3):e1007967. doi: 10.1371/journal.ppat.1007967

Table 1. Sampling plan and infection status of the samples.

Organism Country Administative regions or districts Period Nb samples 16SrV infection Nb sequenced (map)2 Multiple sequences (map)3
Alnus glutinosa France Alsace, Aquitaine, Bretagne, Limousin, Midi-Pyrénées 2006–2010 104 77% 59 55%
Germany Bayern, Rheinland-Pfalz 1997–2010 40 80% 31
Hungary Gyor, Heves, Pest, Somogy, Zala 2008–2010 38 92% 34
Italy Basilicata, Friuli, Piemonte, Toscana, Veneto 2007–2010 45 100% 26
Serbia Bor, Braničevo, Rasina, Šumadija 2007–2010 26 100% 26
Clematis vitalba France Alsace, Aquitaine 2009–2010 24 0% 0 no
Hungary Fejer, Gyor, Heves, Zala 2009–2010
22 50% 11
Vitis vinifera France Aquitaine, Alsace, Bourgogne, Midi-Pyrénées, PACA, Poitou-Charentes, Rhône-Alpes 2005–2011 37 Nd1 37 no
Germany Bayern, Rheinland-Pfalz 1995–2000 14 Nd1 14
Italy Piemonte, Toscana, Valle d’Aosta, Veneto 2010 16 Nd1 16
Serbia Beograd, South Bačka, Rasina, Nišava, Šumadija, Srem, Zaječar 2002–2006 14 Nd1 10
Scaphoideus titanus France Aquitaine, Midi-Pyrénées 2005–2010 9 Nd1 8 no
Serbia Nišava, Srem 2010 4 Nd1 4
Oncopsis alni France Alsace, Aquitaine, Bourgogne 2009–2015 568 22% 124 7%
Germany Rheinland-Pfalz 2009–2015 790 19% 108
Hungary Somogy, Veszprem 2010 28 21% 2
Serbia Bor 2010 68 20% 6
Allygus modestus or mixtus France Alsace, Aquitaine, Bourgogne 2014–2015 71 40% 32 9%
Germany Rheinland-Pfalz 2014–2015 178 66% 108
Orientus ishidae France Alsace, Aquitaine, Bourgogne 2014–2015 131 50% 66 4%
Germany Rheinland-Pfalz 2014–2015 23 61% 14

1. Not done, samples were directly tested by nested-PCR map

2. Number of samples for which map gene was amplified and sequenced

3. Percentage of samples for which multiple sequences were observed for map gene