Table 1. Sampling plan and infection status of the samples.
Organism | Country | Administative regions or districts | Period | Nb samples | 16SrV infection | Nb sequenced (map)2 | Multiple sequences (map)3 |
---|---|---|---|---|---|---|---|
Alnus glutinosa | France | Alsace, Aquitaine, Bretagne, Limousin, Midi-Pyrénées | 2006–2010 | 104 | 77% | 59 | 55% |
Germany | Bayern, Rheinland-Pfalz | 1997–2010 | 40 | 80% | 31 | ||
Hungary | Gyor, Heves, Pest, Somogy, Zala | 2008–2010 | 38 | 92% | 34 | ||
Italy | Basilicata, Friuli, Piemonte, Toscana, Veneto | 2007–2010 | 45 | 100% | 26 | ||
Serbia | Bor, Braničevo, Rasina, Šumadija | 2007–2010 | 26 | 100% | 26 | ||
Clematis vitalba | France | Alsace, Aquitaine | 2009–2010 | 24 | 0% | 0 | no |
Hungary | Fejer, Gyor, Heves, Zala | 2009–2010 |
22 | 50% | 11 | ||
Vitis vinifera | France | Aquitaine, Alsace, Bourgogne, Midi-Pyrénées, PACA, Poitou-Charentes, Rhône-Alpes | 2005–2011 | 37 | Nd1 | 37 | no |
Germany | Bayern, Rheinland-Pfalz | 1995–2000 | 14 | Nd1 | 14 | ||
Italy | Piemonte, Toscana, Valle d’Aosta, Veneto | 2010 | 16 | Nd1 | 16 | ||
Serbia | Beograd, South Bačka, Rasina, Nišava, Šumadija, Srem, Zaječar | 2002–2006 | 14 | Nd1 | 10 | ||
Scaphoideus titanus | France | Aquitaine, Midi-Pyrénées | 2005–2010 | 9 | Nd1 | 8 | no |
Serbia | Nišava, Srem | 2010 | 4 | Nd1 | 4 | ||
Oncopsis alni | France | Alsace, Aquitaine, Bourgogne | 2009–2015 | 568 | 22% | 124 | 7% |
Germany | Rheinland-Pfalz | 2009–2015 | 790 | 19% | 108 | ||
Hungary | Somogy, Veszprem | 2010 | 28 | 21% | 2 | ||
Serbia | Bor | 2010 | 68 | 20% | 6 | ||
Allygus modestus or mixtus | France | Alsace, Aquitaine, Bourgogne | 2014–2015 | 71 | 40% | 32 | 9% |
Germany | Rheinland-Pfalz | 2014–2015 | 178 | 66% | 108 | ||
Orientus ishidae | France | Alsace, Aquitaine, Bourgogne | 2014–2015 | 131 | 50% | 66 | 4% |
Germany | Rheinland-Pfalz | 2014–2015 | 23 | 61% | 14 |
1. Not done, samples were directly tested by nested-PCR map
2. Number of samples for which map gene was amplified and sequenced
3. Percentage of samples for which multiple sequences were observed for map gene