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. 2020 Mar 31;11:451. doi: 10.3389/fmicb.2020.00451

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Copyright © 2020 Saralegui, Ponce-Alonso, Pérez-Viso, Moles Alegre, Escribano, Lázaro-Perona, Lanza, de Pipaón, Rodríguez, Baquero and del Campo.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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PlacnetW output reflecting the plasmid sequences detected. All contigs from each genome are represented as blue nodes connected by continued lines. Yellow nodes represent reference genomes from the NCBI BLAST database. Discontinued lines link each contig to their closest reference genome/s. Finally, each genome appears represented by all its contigs displayed around their closest reference genome identity. Contigs containing plasmid sequences are highlighted in different colored nodes. REL, relaxase; RIP, replication initiation protein.