TABLE 2.
Collection | Isolates | Accession Number | Contigs | Reads | Size (bp) | GC (%) | Seq. Depth | N50 |
Historical | 4F-69 | QZVX00000000 | 20 | 2,374,810 | 5,035,544 | 59.6 | 63 | 2,820,768 |
6F-69 | RAIC00000000 | 23 | 1,394,190 | 5,095,011 | 59.6 | 37 | 518,765 | |
13F-69 | SNQH00000000 | 65 | 2,457,194 | 5,279,779 | 59.1 | 66 | 163,753 | |
15F-69 | RAID00000000 | 22 | 1,840,822 | 5,238,206 | 59.5 | 49 | 2,937,699 | |
Contemporary | O1-16 | QYRU00000000 | 26 | 3,232,838 | 5,102,926 | 59.7 | 87 | 600,674 |
O7-16 | QYRV00000000 | 21 | 2,215,906 | 5,127,038 | 59.7 | 59 | 3,175,227 | |
O10-16 | QYSA00000000 | 22 | 1,950,698 | 5,105,131 | 59.7 | 52 | 600,674 | |
O11-16 | QYSB00000000 | 23 | 1,925,266 | 5,057,421 | 59.8 | 51 | 580,213 |
N50, minimum contig length needed to cover 50% of the genome; GC, percentage of guanine-cytosine content.