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. 2020 Apr 7;19:86. doi: 10.1186/s12934-020-01342-z

Table 6.

Engineered strains of H. bluephagenesis TD01

Engineered strain Parent strain Metabolic engineering strategy Effect on PHA synthesis Mode of study References
TD04 TD01 Deletion of prpC gene CDW of 8.9 g/L containing 70.12% (wt) of P(3HB-co-12.03 mol% 3HV) in presence of 0.5 g/L of propionic acid Shake flasks [98]
TD-prpC6prpC7 TD01 Controlled repression of prpC gene using CRISPRi systems Improved CDW of 14.67 g/L containing 73.78% (wt) P(3HB-co-12.70 mol% 3HV) using 1.0 g/L of propionic acid as co-substrate Shake flasks [110]
TD08 TD04 Deletion of three phaZ genes CDW of 80 g/L containing 70% (wt) of P(3HB-co-8 mol% 3HV) in 0.5 g/L of propionic acid 500-L fermentor [98]
TD08 (pSEVA341-thrACBilvA) TD08 Overexpression of thrACB operon and ilvA gene Synthesis of PHBV with 3HV up to 6 mol% without using 3HV precursor Shake flasks [111]
TD08AB TD08 Chromosomal expression of E. coli scpA-argK-scpB fragment CDW of 54 g/L containing 57% (wt) P(3HB-co-8 mol% 3HV) 6-L fermentor [122]
TD08AB (Δsdhicl) TD08AB Deletion of sdhE and icl genes 78% increase in 3HV yield Shake flasks [25]
TY194(ΔsdhEΔicl) TD1.0(ΔprpC)

Integration of scpAB under the control of a Pporin promoter;

deletion of sdhE and icl genes

PHBV with 18 mol% 3HV content in presence of waste gluconate and glucose Shake flasks [25]
TY194 (ΔsdhE, G7::Pporin-ppc) TY194 (ΔsdhE) Integration of ppc and vgb genes under the control of Pporin and P8vgb promoter PHBV with 25 mol% 3HV from glucose and gluconate Shake flasks [25]
TD40 TD01 Integration of orfZ gene of Clostridium kluyveri Block co-polymer of P3HB4HB with 16 mol% 4HB using GBL as co-substrate 1000-L fermentor [126]
TDH4 TD01 orfZ expression using moderate promoter 4HB mol% similar to TD40 was achieved by consuming 17% less GBL 7-L fermentor [127]
TDH5 TD01 orfZ expression using strong promoter 40% higher 4HB mol% than TD40 was achieved from GBL as co-substrate 7-L fermentor [127]
TDH4-pCD-ΔphaP1 TDH4 Deletion of phaP1 and overexpression of minCD Synthesis of large P3HB4HB granules of axial length 4 µm from GBL as co-substrate Shake flasks [116]
TDWT-D2 TD01 Introduction of double plasmid for expression of orfZ, ogdA, sucD, and 4hbd genes Incorporation of 0.17 mol% 4HB solely from glucose Shake flasks [128]
TD△gabD2-D2 TDWT-D2 Deletion of gabD2 and gabD3 Incorporation of up to 24.9 mol% 4HB 7-L fermentor [128]
TD68-194 TDG (gabD2 and gabD3 deleted TD01 derivative) Chromosomal integration of the orfZ and 4hbd-sucD-ogdA genes using HRCGE system Best 4HB-producing strain with 48.2 g/L CDW containing 75% (wt) P(3HB-co-16 mol% 4HB) solely from glucose 7-L fermentor [26]
TD08 (pRE112-pMB1-udhA) TD08 Overexpression of udhA CDW of 12 g/L containing 92% (wt) PHB Shake flasks [98]
TD01PC TD01 Deletion of phaC gene and integration of the phaCRe downstream of the porin operon 12% increase in PHB yield Shake flasks [133]
TDPIΔC (pSEVA341-phaC Re) TD01ΔphaC Plasmid expression of phaCRe using inducible promoter PHB content up to 81% (wt) Shake flasks [133]
TDPI (pBBR1-Ppolac-phaCAB) TDPI (TD01 derivative with lacI gene inserted downstream of the porin operon) Plasmid expression of phaCABRe using inducible promoter Increased PHB concentration up to 7 g/L Shake flasks [134]
TD-HIGH TD01 Chromosomal expression of the phaCAB operon 38% enhancement in PHB production 10-L fermentor [135]
TD01 (tat-vgb) TD01 Periplasmic expression of vgb with the help of the Tat peptide signal 50% improvement in CDW and PHB concentration Shake flasks [137]
TDHCD-R3 TDHCD-Ro (TD01 derivative with ΔpyrF deleted, T7-like RNA polymerase Mmp1 and vgb integrated into genome and harbouring mutagenesis plasmid) Three rounds of selection in medium containing toxic metabolites 41.7% increase in CDW and 8.2% increase in PHB content 7-L fermentor [24]
TDHCD-R3-8-3 TDHCD-R3 Plasmid expression of phaCABRe 12.3% increase in PHB content; CDW of 90.5 g/L with 78.8% (wt) PHB 7-L fermentor [24]