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. 2020 Apr 6;8:52. doi: 10.1186/s40168-020-00822-z

Table 1.

Significance of statistical tests for pairwise comparisons of community diversity metrics between natural vs autoclaved phage suspension

Alpha diversity Beta diversity
Faith-PD Evenness Shannon UniFrac (unweighted) UniFrac (weighted) Jaccard (qualitative) Bray-Curtis (quantitative)
During colonization
 BS1PS1 0.916 0.347 0.250 0.058 0.208 0.108 0.106
 BS1PS2 0.754 0.250 0.174 0.705 0.462 0.442 0.185
 BS2PS2 0.916 0.347 0.250 0.27 0.244 0.017 0.104
 BS2PS1* 0.250 0.117 0.028 0.377 0.128 0.051 0.045
 BS1PC* 0.464 0.028 0.016 0.058 0.083 0.008 0.013
 BS2PC 0.462 0.806 0.624 0.036 0.123 0.035 0.104
After colonization
 BS1PS1 0.386 0.772 1 0.086 0.771 0.027 0.235
 BS1PS2 0.025 0.654 0.101 0.057 0.217 0.554 0.263
 BS2PS2 0.148 0.386 1 0.027 0.148 0.025 0.31
 BS2PS1* 0.563 0.043 0.083 0.118 0.024 0.05 0.05
 BS1PC 0.174 0.601 0.916 0.041 0.168 0.035 0.329
 BS2PC 0.624 0.462 0.806 0.159 0.432 0.166 0.238
Natural soil
 S1PS1 0.028 0.754 0.075 0.112 0.178 0.136 0.229
 S1PS2 0.327 0.327 0.624 0.756 0.181 0.76 0.734
 S2PS2 0.456 0.296 0.654 0.711 0.671 0.752 0.739
 S2PS1* 0.025 0.179 0.025 0.017 0.049 0.026 0.049
 S1PC 0.086 0.05 0.05 0.852 0.695 0.098 0.268
 S2PC* 0.086 0.014 0.141 0.072 0.021 0.011 0.008

Italicized p values < 0.05; asterisk (*) highlights treatments where both alpha and beta diversity were changed significantly (p values < 0.05) based on Kruskal-Wallis and PERMANOVA tests, respectively