Table 1.
Rax and Rax2 orthologs in various animal species.
| Group | Taxon name | Genome or transcriptome | Reference ID | Genome assembly level | Rax | Rax2 |
|---|---|---|---|---|---|---|
| Porifera | Amphimedon queenslandica | Genome | GCA_000090795.1 | Scaffold | – | – |
| Porifera | Aplysina aerophoba | Genome | GCA_900275595.1 | Contig | – | – |
| Porifera | Sycon ciliatum | Transcriptome | ERR466755 | n.a. | – | – |
| Ctenophora | Pleurobrachia bachei | Genome | GCA_000695325.1 | Scaffold | – | – |
| Ctenophora | Mnemiopsis leidyi |
Genome Transcriptome |
GCA_000226015.1 SRR1971277 |
Scaffold | – | – |
| Ctenophora | Beroe ovata | Genome | GCA_900239995.1 | Contig | – | – |
| Placozoa | Trichoplax adhaerens | Genome | GCA_000150275.1 | Scaffold | – | – |
| Placozoa | Trichoplax | Genome | GCA_003344405.1 | Scaffold | – | – |
| Cnidaria | Tripedalia cystophora | Transcriptome | SRR8101523 | n.a. | a | – |
| Cnidaria | Nematostella vectensis | Genome | GCA_000209225.1 | Scaffold | XM_001634160.1 | – |
| Cnidaria | Stylophora pistillata | Genome | GCA_002571385.1 | Scaffold | XM_022924671.1 | – |
| Cnidaria | Pocillopora damicornis | Genome | GCA_003704095.1 | Scaffold | XM_027180944.1 | – |
| Cnidaria | Orbicella faveolata | Genome | GCA_002042975.1 | Scaffold | XM_020776224.1 | – |
| Bilateria | Drosophila melanogaster | Genome | GCA_000001215.4 | Chromosome | NM_166413.3 | – |
| Bilateria | Apis mellifera | Genome | GCA_003254395.2 | Chromosome | XM_001119966.5 | – |
| Bilateria | Caenorhabditis elegans | Genome | GCA_000002985.3 | Complete Genome | NM_059845.2 | – |
| Bilateria | Octopus bimaculoides | Genome | GCA_001194135.1 | Scaffold | XM_014922170.1 | – |
| Bilateria | Mizuhopecten yessoensis | Genome | GCA_002113885.2 | Scaffold | XM_021516578.1 | – |
| Bilateria | Meara stichopi | Transcriptome | n.a. | n.a. | KY709787.1 | – |
| Bilateria | Acanthaster planci | Genome | GCA_001949145.1 | Scaffold | XM_022243979.1 | – |
| Bilateria | Saccoglossus kowalevskii | Genome | GCA_000003605.1 | Scaffold | NM_001164903.1 | – |
| Bilateria | Branchiostoma belcheri | Genome | GCA_001625305.1 | Scaffold | XM_019761392.1 | – |
| Bilateria | Ciona intestinalis | Genome | GCA_000224145.2 | Chromosome | NM_001032511.1 | – |
| Bilateria | Eptatretus burgeri | Genome | GCA_900186335.2 | Scaffold | ENSEBUT00000011203.1 | – |
| Bilateria | Petromyzon marinus | Genome | GCA_002833325.1 | Scaffold | b | – |
| Bilateria | Callorhinchus milii | Genome | GCA_000165045.2 | Scaffold | XM_007903126.1 | XM_007908006.1 |
| Bilateria | Erpetoichthys calabaricus | Genome | GCA_900747795.2 | Chromosome | XM_028803026.1 | XM_028814691.1 |
| Bilateria | Acipenser ruthenus | Genome | GCA_004119895.1 | Scaffold | RXM93534.1 | RXM94969.1 |
| Bilateria | Lepisosteus oculatus | Genome | GCA_000242695.1 | Chromosome | XM_006627139.2 | XM_015365287.1 |
| Bilateria | Danio rerio | Genome | GCA_000002035.4 | Chromosome | NM_131227.1 | |
| Bilateria | Takifugu rubripes | Genome | GCA_901000725.2 | Chromosome | XM_029837663.1 | |
| Bilateria | Latimeria chalumnae | Genome | GCA_000225785.1 | Scaffold | XM_006005788.1 | XM_005999053.1 |
| Bilateria | Xenopus tropicalis | Genome | GCA_000004195.3 | Chromosome | XM_002936669.4 | XM_002941390.4 |
| Bilateria | Taeniopygia guttata | Genome | GCA_003957565.2 | Chromosome | NM_001243734.1 | XM_030256513.1 |
| Bilateria | Monodelphis_domestica | Genome | GCA_000002295.2 | Chromosome | XM_007487510.2 | XM_001373844.3 |
| Bilateria | Homo sapiens | Genome | GCA_000001405.27 | Chromosome | NM_013435.3 | NM_032753.3 |
| Bilateria | Mus musculus | Genome | GCA_000001635.8 | Chromosome | NM_013833.2 | – |
a
The putative sequence of Rax ortholog was obtained from transcriptome
b
The putative sequence of lamprey Rax was directly retrieved from the genomic sequence using UCSC Genome Browser.