Table 4.
Abundance of the major TE classes in the 16 Oryza sativa genomes.
| Variety Name | Total | LTR-RT | LINEs | SINEs | DNA_TEs | Unclassified |
|---|---|---|---|---|---|---|
| NIPPONBARE | 46.07 | 23.55 | 1.52 | 0.41 | 16.18 | 4.41 |
| CHAO MEO::IRGC 80273-1 | 46.25 | 24.00 | 1.46 | 0.40 | 15.59 | 4.80 |
| Azucena | 47.07 | 24.48 | 1.47 | 0.40 | 15.82 | 4.89 |
| KETAN NANGKA::IRGC 19961-2 | 46.99 | 24.87 | 1.47 | 0.40 | 15.72 | 4.53 |
| ARC 10497::IRGC 12485-1 | 46.95 | 24.74 | 1.48 | 0.40 | 15.68 | 4.65 |
| PR 106::IRGC 53418-1 | 47.95 | 26.82 | 1.41 | 0.39 | 15.05 | 4.28 |
| Minghui 63 | 47.97 | 26.61 | 1.44 | 0.4 | 15.3 | 4.22 |
| IR 64 | 47.87 | 26.82 | 1.42 | 0.40 | 14.97 | 4.26 |
| Zhenshan 97 | 47.95 | 26.79 | 1.42 | 0.39 | 15.19 | 4.16 |
| LIMA::IRGC 81487-1 | 48.04 | 26.87 | 1.40 | 0.39 | 15.01 | 4.37 |
| KHAO YAI GUANG::IRGC 65972-1 | 48.27 | 27.27 | 1.40 | 0.39 | 14.87 | 4.34 |
| GOBOL SAIL (BALAM)::IRGC 26624-2 | 48.15 | 26.99 | 1.40 | 0.39 | 14.99 | 4.38 |
| LIU XU::IRGC 109232-1 | 46.92 | 27.06 | 1.26 | 0.32 | 14.31 | 3.97 |
| LARHA MUGAD::IRGC 52339-1 | 48.05 | 26.74 | 1.41 | 0.39 | 15.09 | 4.42 |
| N 22::IRGC 19379-1 | 47.79 | 25.95 | 1.44 | 0.39 | 15.20 | 4.81 |
| NATEL BORO::IRGC 34749-1 | 47.33 | 25.75 | 1.42 | 0.40 | 15.12 | 4.64 |