Parameter | Original Protocol | Modified Protocol |
---|---|---|
Heat shock prior to electroporation | 40 °C, 350 rpm, 30 min in microtube Eppendorf Thermomixer | Same |
sgRNA expression vector plasmid. pPH331 |
1 µg | 1 µg or 2 µg |
Cas9 expression vector plasmid, pPH187 | 2 µg | 2 µg or 4 µg |
Electroporator | NEPA21, Complex waveform Fig. 1(A) |
Bio-Rad Gene Pulser II, simple exponential pulsesFig. 1(B) |
Post electroporation recovery | 500 µL TAP+Arg 24-well plate Wrap in aluminum |
Same |
Recovery temp, 1st & 2nd day | 1st day 33 °C 2nd day 22 °C |
1st day 30–32 °C 2nd day 21–25 °C |
Recovery Plates | 1.5% agar, TAP + 100 mg/L-arginine + 3 mg/mL yeast extract + 2 mg/mL tryptone + 10 mg/mL paromomycin | Same. Plates without yeast extract and tryptone were also tested; three 100 mm plates per electroporation |
Wait time to count colonies | 7–10 days | 19–25 days |