| ACE2 | angiotensin converting enzyme 2 |
| AGC | automatic gain control |
| APOA1 | Apolipoprotein A1 |
| BMP | bone morphogenic protein |
| CFP | properdin |
| Col1a1 | collagen 1 |
| COL12A1 | collagen type XII, alpha-1 chain |
| COL3A1 | collagen type III, alpha-1 chain |
| CRP | C-reactive protein |
| C1R | complement C1r |
| C4B | complement C4-B |
| DDA | data-dependent acquisition |
| DTT | dithiotreitol, 1,4-bis-(sulfanil)-butan-2,3-diol |
| ECM | extra-cellular matrix |
| ESRD | end-stage renal disease |
| FGA, FGB, FGG | fibrinogen α, β and γ chains |
| FSGS | focal segmental glomerulosclerosis |
| GBM | glomerular basement membrane |
| HBA1 | α-globin |
| HBB-B1 | β1-globin |
| HBB-B2 | β2-globin |
| HBSS | Hank’s Balanced Salt Solution |
| HCD | high energy collision dissociation |
| HDGFL3, HRP3 | Hepatoma-Derived Growth Factor-Related Protein 3 |
| HDL | high-density lipoprotein |
| HPLC-MS | high-performance liquid chromatography mass spectrometry |
| ITIH1 | Inter-alpha-trypsin inhibitor heavy chain H1 |
| IGF | insulin-like growth factor |
| IGFBP1 | insulin growth factor binding protein 1 |
| MS | mass spectrometry |
| NCE | normalized collision energy |
| NFκB | nuclear factor κB |
| PIGR | Polymeric immunoglobulin receptor |
| PPT1 | Palmitoyl-protein thioesterase 1 |
| RNA | ribonucleic acid |
| ROS | reactive oxygen species |
| TFA | trifluoro acetic acid |
| TGF-β | transformin growth factor beta |
| TLR4 | Toll-like receptor 4 |
| SERPINA1 | serine proteinase A1 |
| SERPINA3 | serine proteinase A3 |
| SFTPD | pulmonary surfactant-associated protein D |
| SOST | sclerostin |
| SPP1 | osteopontin |
| TINAG | tubulointerstitial nephritis antigen |
| UMOD | Uromodulin, Tamm-Horsfall protein |
| VEGFA | vascular endothelial cell growth factor-alpha |
| WT1 | Wilms’ tumor 1 |