Table 1.
Chromosome-wise distribution of the identified single-nucleotide polymorphisms (SNPs) and short InDels.
| Chr. | Length | SNP | Short InDel | ||
|---|---|---|---|---|---|
| Number | Density (per kb) | Number | Density (per kb) | ||
| Chr1 | 43,270,923 | 48,669 | 1.12 | 7735 | 0.18 |
| Chr2 | 35,937,250 | 67,302 | 1.87 | 9069 | 0.25 |
| Chr3 | 36,413,819 | 20,399 | 0.56 | 3336 | 0.09 |
| Chr4 | 35,502,694 | 42,156 | 1.19 | 5558 | 0.16 |
| Chr5 | 29,958,434 | 67,386 | 2.25 | 9189 | 0.31 |
| Chr6 | 31,248,787 | 34,848 | 1.12 | 5309 | 0.17 |
| Chr7 | 29,697,621 | 25,681 | 0.86 | 4040 | 0.14 |
| Chr8 | 28,443,022 | 56,474 | 1.99 | 7152 | 0.25 |
| Chr9 | 23,012,720 | 23,331 | 1.01 | 2965 | 0.13 |
| Chr10 | 23,207,287 | 36,435 | 1.57 | 4062 | 0.18 |
| Chr11 | 29,021,106 | 31,309 | 1.08 | 4680 | 0.16 |
| Chr12 | 27,531,856 | 15,522 | 0.56 | 2671 | 0.10 |
| Total | 373,245,519 | 469,512 | 1.26 | 65,766 | 0.18 |