Table 2.
List of all DEGs between the NPR1-2 transgenic line and control non-transgenic ‘Valencia’ line.
| Gene ID | log2 (Fold Change) | padj | Functional Description | E-Value |
|---|---|---|---|---|
| Cs9g18210 | Inf | 2.76E-04 | Cyclic nucleotide-gated ion channel 1 | 1.26E-100 |
| orange1.1t01447 | 10.70 | 2.35E-03 | Transactivator/viroplasmin protein | 2.95E-06 |
| orange1.1t01448 | 10.36 | 3.52E-04 | Putative Polyprotein CP | 2.51E-07 |
| Cs9g18180 | 9.60 | 2.48E-32 | Cyclic nucleotide-gated ion channel 1 | 2.41E-98 |
| orange1.1t04318 | 6.71 | 1.70E-19 | Ankyrin repeat-containing protein | 1.39E-15 |
| orange1.1t04316 | 6.52 | 2.20E-19 | Ankyrin repeat-containing protein | 5.38E-21 |
| Cs1g13910 | 6.34 | 1.76E-02 | Wall-associated receptor kinase-like 10 | 3.06E-167 |
| Cs9g18240 | 5.91 | 3.92E-02 | Cyclic nucleotide-gated ion channel 1 | 1.81E-129 |
| Cs1g03870 | 5.27 | 5.92E-05 | Probable WRKY transcription factor 51 | 8.66E-38 |
| orange1.1t04319 | 5.26 | 8.15E-05 | Ankyrin repeat-containing protein | 5.68E-07 |
| Cs2g27430 | 4.00 | 2.22E-03 | MYB-related protein Myb4 | 1.25E-50 |
| orange1.1t04443 | 3.97 | 3.98E-03 | TMV resistance protein N | 1.09E-39 |
| orange1.1t03802 | 3.96 | 3.80E-02 | Protein Enhanced disease susceptibility 1 | 3.56E-135 |
| Cs2g27410 | 3.86 | 4.63E-05 | MYB-related protein Myb4 | 8.93E-51 |
| orange1.1t04313 | 3.85 | 2.11E-05 | Huamn Ankyrin-2 | 1.79E-15 |
| Cs2g01090 | 3.81 | 1.23E-04 | UPF0481 protein | 8.09E-36 |
| Cs7g11940 | 3.77 | 1.13E-02 | Cytosolic sulfotransferase 12 | 4.84E-116 |
| Cs1g24440 | 3.62 | 2.76E-04 | Salicylate carboxymethyl transferase | 6.62E-158 |
| orange1.1t03083 | 3.33 | 3.98E-03 | Putative ribonuclease H protein | 3.42E-20 |
| Cs1g11960 | 3.31 | 1.15E-04 | G-type lectin S-receptor-like serine/threonine-protein kinase | 6.12-131 |
| Cs5g16310 | 3.17 | 4.40E-05 | Flavanone 3-dioxygenase | 2.30E-69 |
| orange1.1t02071 | 3.13 | 8.55E-05 | UPF0481 protein | 2.10E-28 |
| Cs2g21000 | 3.04 | 3.17E-04 | Linolenate hydroperoxide lyase, chloroplastic | 0 |
| Cs2g13280 | 3.03 | 8.73E-05 | Probable receptor-like protein kinase | 5.18E-98 |
| orange1.1t04913 | 3.02 | 2.44E-03 | TMV resistance protein N | 1.45E-54 |
| Cs7g29570 | 3.00 | 8.73E-05 | Probable WRKY transcription factor 70 | 1.61E-41 |
| Cs4g04210 | 2.84 | 2.92E-04 | Transcription factor bHLH35 | 4.47E-67 |
| orange1.1t01840 | 2.83 | 1.05E-02 | TMV resistance protein N | 8.85E-172 |
| Cs4g05900 | 2.72 | 1.06E-02 | Ankyrin repeat-containing protein | 3.72E-27 |
| Cs3g10110 | 2.62 | 2.54E-03 | LRR receptor-like serine/threonine-protein kinase | 9.01E-17 |
| orange1.1t02504 | 2.55 | 3.90E-03 | Probable disease resistance protein | 3.26E-175 |
| Cs4g18320 | 2.49 | 4.46E-03 | Glutaredoxin-C6 | 2.03E-57 |
| Cs9g12160 | 2.40 | 6.88E-03 | LRR receptor-like serine/threonine-protein kinase GSO1 | 3.67E-14 |
| Cs7g29040 | 2.34 | 2.61E-02 | Heat shock cognate 70 kDa protein | 0 |
| Cs7g15430 | 2.31 | 1.25E-02 | Cytochrome P450 89A2 | 3.06E-171 |
| Cs5g04250 | 2.25 | 2.55E-02 | Mitochondrial outer membrane protein porin of 36 kDa | 3.27E-51 |
| Cs6g01870 | 2.18 | 2.61E-02 | Probable LRR receptor-like serine/threonine-protein kinase | 6.63E-13 |
| orange1.1t00589 | 2.14 | 3.59E-02 | NAC domain-containing protein 68 | 1.50E-20 |
| Cs5g06000 | 2.13 | 3.10E-02 | Copper methylamine oxidase | 3.84E-167 |
| Cs1g03700 | 2.09 | 3.15E-02 | Mechanosensitive ion channel protein 10 | 1.20E-13 |
| Cs5g12280 | −6.39 | 6.99E-05 | Agamous-like MADS-box protein AGL8 | 3.38E-33 |
| Cs5g12290 | −5.76 | 1.70E-06 | Agamous-like MADS-box protein AGL8 | 9.58E-34 |
| Cs7g11800 | −3.65 | 8.18E-06 | Developmental protein SEPALLATA 2 | 8.38E-33 |
| Cs9g07970 | −2.33 | 8.25E-03 | 3-ketoacyl-CoA synthase 11 | 0 |
| orange1.1t04139 | −2.29 | 1.01E-02 | Geraniol 8-hydroxylase | 0 |