Table 2.
Description of publicly available human proteomic studies used in the proteome meta-analysis.
| Ref. | Sample | Labeling | Technique | Validation Method |
|---|---|---|---|---|
| [6] | PTT | CD | nanoLC-ESI-MS/MS | IHC |
| [60] | PTT | CD | MALDI-TOF MS, nanoLC-ESI MS/MS | - |
| [61] | PTT | Free | MALDI-TOF/TOF MS, MS/MS | IHC |
| [62] | PTT | Free | MS/MS | WB |
| [63] | PTT | Free | MS/MS | WB, IHC |
| [64] | PTT | Free | LC-MS/MS | ELISA |
| [65] | PTT | Free | LC-MS/MS | ELISA |
| [66] | PTT | Free | MS/MS | - |
| [67] | PTT | Free | LC-MS/MS | IHC |
| [68] | PTT | Free | MALDI-TOF MS | ELISA |
| [69] | PTT | Free | LC-MS/MS | IHC |
| [70] | PTT | Free | MALDI-TOF MS | IHC, WB |
| [71] | PTT | CD | MALDI-TOF/TOF-MS | WB, IHC |
| [72] | PTT | Free | MALDI-TOF MS | WB |
| [73] | PTT | Free | MALDI-TOF/TOF-MS | - |
| [29] | PTT | Free | LC-MS/MS | IHC, WB |
| [74] | PTT | Free | LC-MS/MS | - |
| [75] | PTT | SI | LC-MS/MS | - |
| [76] | PTT | Free | LC-MS/MS | IHC, WB |
| [77] | PTT | LP | MS/MS | - |
| [78] | PTT | Free | LC-MS(MS)2 | - |
| [79] | PTT | Free | UHPLC/MS/MS2 | - |
| [80] | Urine | CD | MALDI-TOF MS | IB |
| [81] | Serum | Free | MALDI-QIT-TOF-MS | |
| [82] | Serum | Free | (MRM) | WB |
| [83] | Serum | Free | MS/MS | - |
| [84] | Blood | Free | MALDI-MS | ELISA |
| [85] | Serum | CD | MALDI-TOF/ TOF–MS | ELISA, WB |
| [86] | Serum | IL | LC-MS / MS | - |
| [87] | Urine | Free | LC/MS /MS | - |
| [88] | Plasma | Free | LC−MS/MS | ELISA, WB, IHC, RT-qPCR |
| [89] | Free | GeLC-MS/MS | - | |
| [90] | Serum | Free | MALDI-TOF MS | PCR, WB, IHC |
| [91] | PJ | Free | MALDI-TOF MS MS/MS | WB, IHC, ELISA |
| [92] | Serum | Free | MALDI-TOF | WB |
Ref.: Reference; PDF: Pancreatic duct fluid, PJ: Pancreatic juice; PTT: Pancreatic tumor tissue; SI: Stable Isotopic; IL: Isobaric Label; CD: CyDyes (Fluorescence Cyanine Dyes); LC-MS/MS: Liquid chromatography-tandem mass spectrometry; LC-MRM/MS: Multiplexed liquid chromatography multiple-reaction-monitoring mass spectrometry; Nano-RPLC-MS/MS: Nanoscale liquid chromatography coupled to tandem mass spectrometry; ESI-MS/MS: Electrospray ionization mass spectrometry; MALDI-TOF MS: Laser desorption ionization-time of flight mass spectrometry; MS/MS: Tandem mass spectrometry; MRM: Multiple Reaction Monitoring; IHC: Immunohistochemistry; WB: Western Blot; IB: Immunoblotting.