CG gene |
cancer-germline or cancer-testis gene |
CIN |
chromosomal instability |
CAN |
copy number alteration |
DAC |
decitabine, 5-aza-2′-deoxycytidine |
DEG |
differentially expressed gene |
DE-CG gene |
differentially expressed CG gene |
DMC |
differentially methylated CpG site |
DMR |
differentially methylated region |
DNMT |
cytosine DNA methyltransferase |
EOC |
epithelial ovarian cancer |
FDR |
false discovery rate |
FTE |
fallopian tube epithelia |
GDHO |
global DNA hypomethylation |
GSEA |
gene set enrichment analysis |
HGSOC |
high-grade serous ovarian cancer |
IPA |
Ingenuity Pathway Analysis |
LAD |
lamina-associated domain |
NE |
normal epithelia (OSE + FTE) |
NO |
bulk normal ovary |
OSE |
ovarian surface epithelia |
PCA |
principal component analysis |
RE |
repetitive DNA elements |
RMA |
robust multichip average |
TET |
Ten-eleven translocation methylcytosine dioxygenase |
TF |
transcription factor |