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. 2020 Apr 7;20:143. doi: 10.1186/s12870-020-02363-x

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 3 — Responsive genes involved in photosynthesis. Differentially expressed genes obtained by RNA-Seq were illustrated in relation to the major processes they were involved. Colored columns corresponded to fold changes of the transcripts as indicated by the definition of color gradients (bottom). The symbol ‘+’ and the red gradient columns represented up-regulated genes and the fold of induction; while ‘-‘and the green gradient columns referred to down-regulated genes. Numbered responsive genes were annotated as followings: 23. Os03g0592500, light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2); 24. Os07g0558400, light-harvesting complex II chlorophyll a/b binding protein 4(LHCB4); 25. Os01g0720500, light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); 26. Os09g0346500, light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); 27. Os03g0333400, photosystem II Psb27 protein (psb27); 28. (Os08g0560900), photosystem I subunit II (psaD); 29. Os06g0320500, light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1); 30. Os02g0197600, light-harvesting complex I chlorophyll a/b binding protein 3 (LHCA3); 31. Os12g0292400, ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] (rbcS)