Table A1.
List of proteomes used to extract MHC-I binders. See also Methods.
| Organism | Proteome Details | Proteins | ID | Download Date (d/m/y) | Unique 6-mers (#) |
|---|---|---|---|---|---|
| Ebola virus | Mayinga, Zaire, 1976 | 9 | UP000007209 | 27/09/2017 | 140 |
| Human cyto- megalovirus (HCMV) | Human herpesvirus 5 AD169 Isolate Unknown X17403 | 190 | UP000008991 | 27/09/2017 | 2090 |
| Hepatitis B virus | Genotype D subtype ayw (isolate France/Tiollais/1979) | 7 | UP000007930 | 27/09/2017 | 65 |
| Hepatitis C virus | H77 isolate Unknown AF009606 | 2 | UP000000518 | 27/09/2017 | 112 |
| Human immuno- deficiency virus (HIV) | Type 1 group M subtype B (isolate HXB2) | 9 | UP000002241 | 27/09/2017 | 69 |
| Vaccinia virus | Strain Copenhagen | 257 | UP000008269 | 27/09/2017 | 1955 |
| Zika virus | MR 766 Isolate Unknown AY632535 | 1 | UP000054557 | 27/09/2017 | 118 |
| Listeria monocytogenes | serovar 1/2a (strain ATCC BAA-679/EGD-e ) | 2844 | UP000000817 | 27/09/2017 | 31,251 |
| Plasmodium ovale (Malaria) | Wallikeri | 8636 | UP000078550 | 27/09/2017 | 89,408 |
| Homo sapiens (human) | - | 20,230 | UP000005640 | 01/06/2017 | 263,216 |