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. 2020 Mar 10;9(3):669. doi: 10.3390/cells9030669

Table 1.

Overrepresented categories of Gene Family and AraCyc Pathway in the sets of–S DEGs (p < 0.01).

WT-Specific –S DEGs OX7.5-Specific –S DEGs –S DEGs from Both Lines
Shoots
UP 		(1011 genes)
No significant term		 (459 genes)
No significant term		   (1081 genes)

  • Receptor kinase-like protein family

  • PP2C-type phosphatase

  • Group A PP2C

  • WRKY Transcription Factors
Shoots
DN 		(1351 genes)
No significant term		 (378 genes)
No significant term		   (876 genes)

  • Kinesins

  • Putative tropine reductase family

  • Sulfurtransferase/Rodanase family

  • Chlorophyll biosynthesis

Roots
UP 		  (959 genes)

  • Cytoplasmic ribosomal protein gene family

   (667 genes)

  • Cytoplasmic ribosomal protein gene family

   (1657 genes)

  • Cytoplasmic ribosomal protein gene family

  • Eukaryotic initiation factor gene family

  • WRKY Transcription Factors

  • Glutathione S-transferase family

  • ABC transporters

  • NAC transcription factors

  • tRNA charging

Roots
DN		 (774 genes)
No significant term		 (1007 genes)
No significant term		   (1267 genes)

  • Aquaporin families

  • MIP families

  • Cytochrome P450

  • Glucosinolates biosynthesis

  • Secondary metabolites biosynthesis