Table 1.
Details of mapped QTL groups.
| QTL Group | Phenotypes a | Chr | Interval Size (Mb) b | Num Genes c | Num Local eQTL d |
|---|---|---|---|---|---|
| QG1 | DBN, DBL | X | 0.70 | 57 | 26 |
| QG2 | DST | 2L | 1.91 | 240 | 74 |
| QG3 | DBN | 2L | 0.60 | 66 | 18 |
| QG4 | LBN | 2L | 2.03 | 158 | 50 |
| QG5 | LWA, LBN | 2L | 1.17 | 74 | 16 |
| QG6 | LST | 2L | 0.75 | 103 | 52 |
| QG7 | DST, DBN, LBL, DBL | 2c e | 7.92 | 316 e | 178 e |
| QG8 | DBL | 3L | 0.90 | 85 | 30 |
| QG9 | LBL | 3L | 0.27 | 35 | 17 |
| QG10 | LST, DST, LBN, DBL | 3L | 0.64 | 48 | 23 |
| QG11 | LWA, DWA, LBN | 3R | 1.21 | 124 | 41 |
| QG12 | DWA | 3R | 0.85 | 84 | 27 |
a. The phenotypes generating a QTL that overlaps with a QTL group (DST and LST = dark-phase and light-phase sleep time; DWA and LWA = dark and light waking activity; DBN and LBN = dark and light bout number; DBL and LBL = dark and light bout length). b. The size is given based on release 6 of the Drosophila melanogaster reference genome. For those QTL groups composed of multiple QTL, the interval presented is the minimum interval defined by all overlapping QTL. See Supplementary Table S4 for trait-specific QTL information. c. The number of protein-coding genes implicated by the QTL group interval. d. The number of genes within the QTL group interval that have a local (or cis) eQTL identified by King et al. [25]. e. This QTL overlaps the chromosome 2 centromere. In total, 119/316 of the implicated genes encode histone protein subunits, and 111/178 genes with local eQTL are histone genes.