Table 2.
experimental |
calculatedb |
error |
|||||
---|---|---|---|---|---|---|---|
model | ΔES1–S0 | fOsc | |||||
a-ARMdefault | |||||||
m-Set | |||||||
ASRAT-1 | 52.0 (2.25) | 550 | 52.31.4 (2.27) | 547 | 1.29 | 0.3 (0.01) | −3 |
ASRAT-2d | 52.0 (2.25) | 550 | 54.02.3 (2.34) | 529 | 1.25 | 2.0 (0.09) | −21 |
ASR13C-1d | 53.2 (2.31) | 537 | 55.00.5 (2.38) | 520 | 1.04 | 1.8 (0.08) | −17 |
ASR13C-2 | 53.2 (2.31) | 537 | 54.20.4 (2.35) | 528 | 1.08 | 1.0 (0.04) | −9 |
bRAT | 50.3 (2.18) | 568 | 53.20.1 (2.30) | 537 | 1.25 | 2.9 (0.12) | −31 |
bR13C | 52.2 (2.26) | 548 | 53.30.1 (2.31) | 536 | 0.94 | 1.1 (0.05) | −12 |
bathoRh | 54.0 (2.34) | 529 | 56.20.3 (2.44) | 509 | 0.96 | 2.2 (0.10) | −20 |
BPR | 58.3 (2.53) | 490 | 63.70.2 (2.76) | 449 | 0.57 | 5.4 (0.24) | −41 |
ChRC1C2 | 62.4 (2.71) | 458 | 76.92.4 (3.33) | 372 | 0.88 | 14.5 (0.63) | −86 |
Rh | 57.4 (2.49) | 498 | 57.70.7 (2.50) | 496 | 0.87 | 0.3 (0.01) | −2 |
SqRh | 58.5 (2.54) | 489 | 60.90.2 (2.64) | 469 | 0.80 | 2.4 (0.10) | −20 |
hMeOp | 60.4 (2.62) | 473 | 61.21.7 (2.65) | 467 | 0.72 | 0.8 (0.04) | −6 |
a-Set | |||||||
ASRAT-D217E | 51.8 (2.25) | 552 | 52.01.1 (2.25) | 550 | 1.29 | 0.2 (0.01) | −2 |
Arch1 | 50.3 (2.18) | 568 | 50.51.2 (2.19) | 567 | 1.23 | 0.1 (0.01) | −1 |
Arch2 | 52.0 (2.25) | 550 | 54.50.6 (2.36) | 525 | 1.23 | 2.5 (0.11) | −25 |
ChR2 | 60.8 (2.64) | 470 | 79.92.3 (3.46) | 358 | 0.70 | 19.1 (0.83) | −112 |
ChR2-C128T | 59.0 (2.56) | 485 | 79.71.1 (3.45) | 360 | 0.65 | 20.7 (0.90) | −126 |
KR2-1 | 54.5 (2.36) | 525 | 69.90.9 (3.03) | 409 | 1.46 | 15.5 (0.67) | −116 |
KR2-2d | 54.5 (2.36) | 525 | 69.60.7 (3.02) | 411 | 1.41 | 14.9 (0.66) | −114 |
NM-R3 | 55.3 (2.40) | 517 | 56.10.1 (2.44) | 509 | 1.01 | 0.8 (0.04) | −8 |
C1R | 55.3 (2.40) | 517 | 55.20.2 (2.39) | 518 | 1.05 | −0.2 (−0.01) | +1 |
SRII | 57.5 (2.49) | 497 | 58.00.9 (2.51) | 493 | 1.11 | 0.5 (0.02) | −4 |
SqbathoRh | 53.9 (2.34) | 530 | 55.50.2 (2.41) | 515 | 1.08 | 1.6 (0.07) | −15 |
AARh | 56.3 (2.44) | 508 | 59.00.8 (2.56) | 485 | 0.79 | 2.7 (0.12) | −23 |
BCone | 66.5 (2.88) | 430 | 67.80.1 (2.94) | 430 | 0.63 | 1.3 (0.06) | −8 |
GCone | 53.4 (2.32) | 535 | 55.01.3 (2.39) | 519 | 0.90 | 1.6 (0.07) | −16 |
RCone | 49.7 (2.16) | 575 | 58.61.6 (2.54) | 486 | 0.78 | 8.8 (0.38) | −87 |
mMeOp | 61.2 (2.65) | 467 | 62.50.2 (2.71) | 457 | 0.76 | 1.3 (0.06) | −10 |
PoXeRAT | 50.3 (2.18) | 568 | 50.50.5 (2.19) | 566 | 1.48 | 0.2 (0.01) | −2 |
PoXeR13C | 52.1 (2.26) | 549 | 54.40.2 (2.36) | 525 | 1.07 | 2.2 (0.10) | −24 |
Rh Mutants Set | |||||||
Rh-A292S | 58.2 (2.54) | 491 | 58.70.3 (2.54) | 487 | 0.86 | 0.5 (0.01) | −1 |
Rh-A269T | 55.6 (2.41) | 514 | 56.10.6 (2.44) | 510 | 0.91 | 0.5 (0.02) | −4 |
Rh-E113D | 56.1 (2.43) | 510 | 55.40.4 (2.40) | 516 | 0.91 | −0.7 (−0.03) | +6 |
Rh-E122Q | 59.6 (2.58) | 480 | 60.00.5 (2.60) | 477 | 0.81 | 0.4 (0.02) | −3 |
Rh-F261Y | 56.1 (2.43) | 510 | 56.20.8 (2.44) | 509 | 0.86 | 0.1 (0.01) | −1 |
Rh-G90S | 58.4 (2.53) | 489 | 56.80.7 (2.46) | 503 | 0.90 | −1.6 (−0.07) | +14 |
Rh-T94S | 57.9 (2.51) | 494 | 58.00.7 (2.51) | 493 | 0.86 | 0.1 (0.00) | −1 |
Rh-T118A | 59.1 (2.56) | 484 | 59.70.4 (2.59) | 479 | 0.86 | 0.6 (0.03) | −5 |
Rh-W265Y | 59.0 (2.57) | 485 | 58.80.6 (2.55) | 486 | 0.88 | −0.2 (−0.02) | +1 |
Rh-W265F | 59.6 (2.58) | 480 | 60.00.4 (2.60) | 476 | 0.83 | 0.5 (0.02) | −4 |
Rh-D83N-E122Q | 60.2 (2.61) | 475 | 61.10.6 (2.65) | 468 | 0.76 | 0.9 (0.04) | −7 |
Rh-A292S-A295S-A299C | 59.1 (2.56) | 484 | 58.60.7 (2.54) | 488 | 0.86 | −0.5 (−0.02) | +4 |
ADmax | 20.7 (0.89) | ||||||
MAE ± MAD of | 3.0 ± 3.4 (0.13 ± 0.15) | ||||||
MAE ± MAD of ||Trend Dev.|| | 2.5 ± 1.2 (0.11 ± 0.05) | ||||||
a-ARMcustomized | |||||||
KR2-2(c) | 54.5 (2.36) | 525 | 55.90.4 (2.43) | 511 | 0.91 | 1.5 (0.06) | −14 |
BPR(c) | 58.3 (2.53) | 490 | 57.20.3 (2.48) | 500 | 0.75 | −1.1 (−0.05) | 10 |
RCone(c) | 49.7 (2.16) | 575 | 49.91.3 (2.16) | 572 | 1.12 | 0.2 (0.01) | −3 |
50.3 (2.18) | 568 | 50.70.3 (2.20) | 564 | 1.43 | 0.3 (0.02) | −4 | |
50.3 (2.18) | 568 | 50.40.5 (2.18) | 567 | 1.37 | 0.1 (0.00) | −1 | |
62.4 (2.71) | 458 | 63.80.8 (2.76) | 449 | 0.88 | 1.3 (0.06) | −9 | |
ChR2(c) | 60.8 (2.64) | 470 | 63.31.2 (2.70) | 459 | 0.77 | 1.4 (0.06) | −11 |
ChR2-C128T(c) | 59.0 (2.56) | 485 | 59.20.3 (2.57) | 483 | 0.95 | 0.3 (0.01) | −2 |
ADmaxc | 2.7 (0.12) | ||||||
MAE ± MAD of c | 0.9 ± 0.7 (0.04 ± 0.03) | ||||||
MAE ± MAD of ||Trend Dev.||c | 0.7 ± 0.5 (0.03 ± 0.02) |
Calculated using the a-ARMdefault and the a-ARMcustomized approaches. Differences between calculated and experimental data (, ) are also presented.
Average value of 10 replicas, along with the corresponding standard deviation given as subindex.
For BPR, bRAT, ChRC1C2, ChR2, ChR2-C128T, RCone, and KR2-2 a-ARMcustomized are considered.
ASRAT-2, ASR13C-1, KR2-1, and are excluded from the statistical analysis.