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. Author manuscript; available in PMC: 2020 May 14.
Published in final edited form as: J Chem Theory Comput. 2019 Apr 12;15(5):3134–3152. doi: 10.1021/acs.jctc.9b00061

Table 3.

a-ARMcustomized Models for KR2 [PDB ID 3X3C] Testing All the Possible Combinations of Rotamers for Both Residues Asp-116 and Gln-157a

rotamers
model Asp-116 Gln-157 ΔES1–S0 (λmaxa) ΔExpΔES1S0 (Δλmaxa,Exp)
KR2-1(c) A (0.65) A (0.50) 56.9 (503) 2.4 (−22)
KR2-2(c)b A (0.65) B (0.50) 55.9 (511) 1.5 (−14)
KR2-3(c) B (0.35) A (0.50) 70.0 (408) 15.6 (−117)
KR2-4(c) B (0.35) B (0.50) 69.2 (413) 14.8 (−112)
a

Occupancy factor in parentheses. ΔES1–S0 in kcal mol−1 and λmaxa in nm.

b

Best model, presented in Figure 5 as orange square.