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. 2019 Nov 25;36(7):2001–2008. doi: 10.1093/bioinformatics/btz867

Fig. 3.

Fig. 3.

The mismatch-aware guide matching strategy. Characters are encoded using four-bit notation, as illustrated in the table on the left. For a given genomic position, this step compares the characters of the guide with the characters of the genome using bitwise operations. In the example the guide matching starts from index 24