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. 2020 Apr 8;11(4):224. doi: 10.1038/s41419-020-2415-2

Fig. 6. TCGA analysis reveals a link between ASPP1 status and Snail2 expression as well as NF-κB signalling in CRC samples.

Fig. 6

a Bar plot shows the SNAI2, mRNA expression between high and low ASPP1 groups in colorectal adenocarcinoma (TCGA, Nature 2012) data. **P < 0.01. b The scatter plot for the correlation between SNAI2, mRNA expression (RPKM) (log10) and ASPP1, mRNA expression (RPKM) (log10) (Pearson’s correlation (r) = −0.2679 and P = <0.0001). c Heat-maps of the columns indicate each individual sample in high and low PPP1R13B (ASPP1) groups across each mRNA in TCGA colorectal adenocarcinoma data, which obtained from cBioportal website. Rows indicates mRNA expressions (RNASeq, RPKM). Dark blue colour indicates low expression of mRNA and dark pink colour illustrates highly expressed mRNAs. Unpaired t-test was analysed to find the significantly different mRNAs in colorectal adenocarcinoma (TCGA, Nature 2012) dataset. n represents the number of samples in each group. d The genes that were upregulated in high ASPP1 group was analysed in ToppGene Suite website to show which pathways are regulated. Histogram shows NF-κB related pathways. Y-axis shows the pathways and top x-axis and bottom x-axis show the number of shared mRNAs in each pathway and −log10 (P value), respectively.