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. 2020 Apr 8;11:1740. doi: 10.1038/s41467-020-15336-3

Fig. 1. Bioinformatic pipeline to detect the mixed haplotypes from 11,867 trios.

Fig. 1

a Sample quality control. b Search for the putative trios carrying the mixed haplotype pattern. I. Distribution of the informative trios where at least one variant (variant allele fraction (VAF) > 5%) is detected in the father, but not in the mother. II. Distribution of trios where at least one variant was shared in the fathers and their offspring. c Number of homoplasmic variants in 32 fathers. Yellow bars represent fathers’ homoplasmic variants also observed in the mothers and their offspring; pink bars represent the homoplasmic variants also observed in their offspring, but not detected in the mothers. Blue bars represent homoplasmic variants only observed in the fathers which are not detected in either the mothers or their offspring. d Pedigrees of the seven families showing mixed haplotypes. The symbols with lines represent the individuals carrying the mixed haplotypes.