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. 2020 Mar 30;5(13):7254–7261. doi: 10.1021/acsomega.9b04042

Table 3. E. coli Protein Targeting in Peroxisomes of Host Cell, Including Percentage (%) Expected Accuracy, pI Value, Molecular Weight (dalton), and Functions.

accession no. protein name mol. weight (dalton) pI value protein targeting results using LocTree3 expected accuracy (%) functions in bacteria
P33232 l-lactate dehydrogenase 42 728.19 6.33 peroxisome 83 induced by l-lactate, aerobically
P0AET8 7α-hydroxysteroid dehydrogenase 26 778.59 5.22 peroxisome 83 7α-dehydroxylation of cholic acid, yielding deoxycholic acid and lithocholic acid, respectively. Highest affinity with taurochenodeoxycholic acid
P0A6F3 glycerol kinase 56 099.57 5.36 peroxisome 86 a key enzyme in the regulation of glycerol uptake and metabolism. The activity of this regulatory enzyme is affected by several metabolites. The inhibition by fructose 1,6-biphosphate causes alterations in the quaternary structure of the enzyme. Induced by l-α-glycerol-3-phosphate. Increases following exposure to the uncoupler of oxidative phosphorylation 2,4-dinitrophenol
P0ABU0 naphthoate synthase 31 633.08 5.99 peroxisome 93 converts O-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoic acid (DHNA). Involved in menaquinone biosynthesis
P0ADG7 inosine-5′-monophosphate dehydrogenase 52 022.45 6.02 peroxisome 85 involved in the first step of GMP biosynthesis from IMP. Induced by low pH during anaerobic growth
P0ABH7 citrate synthase 48 014.99 6.21 peroxisome 87 involved in the tricarboxylic acid cycle and is allosterically inhibited by NADH
P0AD96 Leu/Ile/Val-binding protein 36 772.53 5.28 peroxisome 82 component of the leucine, isoleucine, valine, (threonine) transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids. Increases following exposure to the uncoupler of oxidative phosphorylation 2,4-dinitrophenol and in the physiological short-term adaptation to glucose-limitation
P04816 leucine-specific binding protein 36 982.71 5.07 peroxisome 82 component of the leucine-specific transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids. Increases following exposure to the uncoupler of oxidative phosphorylation 2,4-dinitrophenol. It decreases after benzoic acid treatment
P65556 putative Nudix hydrolase YfcD 20 375.86 4.7 peroxisome 80 not available