Table 4.

Specific species. Linear discriminative analysis (LDA) effect size (LEfSe) test showing the species associated with the three groups (Tumor, Obese, Control). Positive values of LDA scores (log 10) are indicative for enriched taxa in a given group. Significant p values are highlighted in bold. Abbreviations: m = mean; sd = standard deviation; FDR = false discovery rate; B = Bacteroidetes; F = Firmicutes; P = Proteobacteria; V = Verrucomicrobia.

		Tumor		Obese		Control		p Value FDR
Phylum	Species	M	sd	m	sd	m	sd		LDA Score
B	Alistipes putredinis	3.03%	3.02%	0.88%	1.41%	3.02%	2.81%	0.03	5.0
	Alistipes senegalensis	1.54%	3.11%	0.41%	0.92%	0.52%	0.87%	0.02	4.8
	Barnesiella intestinihominis	0.05%	0.11%	0.02%	0.04%	0.11%	0.18%	0.03	2.9
F	Blautia wexlerae	0.25%	1.38%	0.46%	1.10%	0.84%	3.01%	0.02	4.5
	Christensenella minuta	0.20%	0.64%	0.00%	0.00%	0.11%	0.27%	0.03	4.0
	Clostridium bartlettii	0.32%	0.79%	1.90%	4.29%	0.29%	0.74%	0.05	4.9
	Clostridium bolteae	0.01%	0.01%	0.03%	0.08%	0.01%	0.02%	0.00	4.6
	Clostridium clariflavum	0.10%	0.22%	0.00%	0.01%	0.22%	0.40%	0.03	4.1
	Eubacterium rectale	0.03%	0.05%	0.10%	0.15%	0.35%	0.57%	0.02	4.2
	Lactobacillus rogosae	0.10%	0.15%	0.11%	0.19%	0.43%	0.54%	0.02	4.3
	Papillibacter cinnamivorans	0.16%	0.32%	0.01%	0.02%	0.38%	0.96%	0.03	4.3
	Ruminococcus faecis	0.12%	0.42%	0.12%	0.58%	0.08%	0.17%	0.03	3.7
P	Hafnia alvei	7.81%	11.15%	1.83%	6.82%	0.78%	1.49%	0.00	5.6
	Parasutterella excrementihominis	0.13%	0.41%	1.21%	2.90%	1.19%	2.76%	0.02	4.7
	Yokenella regensburgei	0.13%	0.50%	0.02%	0.07%	0.00%	0.00%	0.03	3.8
V	Akkermansia muciniphila	1.10%	2.13%	0.07%	0.19%	0.03%	0.06%	0.01	4.8