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. 2020 Mar 25;5(13):7705–7715. doi: 10.1021/acsomega.0c00684

Table 4. Binding Sites and Docking Scores of Emodin and Alaternin along with Reference Compounds in the Modeled Human Vasopressin V1A Receptor (hV1AR).

compounds binding energy (kcal/mol) no. of H-bonds H-bond interaction residues nonpolar interacting residues
AVPa (agonist) –9.14 5 Asp202, Glu54, Asp112, Ile330 Trp204, Ile330, Ala101, Ala334, Val132, Met135
SR49059a (antagonist) –8.98 5 Gln131, Gln108, Lys128 Phe307, Trp204, Val132, Met135, Met220, Ala334, Ala205, Gln131, Thr333
emodin –6.36 4 Met135, Gln131, Ala101, Gly337 Val100, Ala101, Ala334, Phe307, Trp304, Met135
alaternin –6.40 5 Lys128, Gln131, Ser213, Val217, Gln311 Lys128, Met135, Met220, Phe189, Ala205
a

Arginine vasopressin (AVP) and (2S)1-{(2R,3S)-5-chloro-3-(2-chloro-phenyl)-1-(3,4-dimethoxybenzene-sulfonyl)-3-hydroxy-2,3-dihydro-1H-indole-2-carbonyl}pyrrolidine-2-carboxamide (SR49059) were used as reference ligands.