Table 1.
Correspondence between Detected SNP Sites and Potential RNA Editing Sites
Gene | Analyzed Site | No. of SNPs (%) | No. of pRNAea | No. of Correspondences |
---|---|---|---|---|
Mitochondria | ||||
cox1 | 1,455 | 57 (3.9) | 29 | 26 |
cox3 | 771 | 56 (7.3) | 24 | 24 |
cob | 1,062 | 72 (1.8) | 19 | 18 |
Plastid | ||||
psbA | 1,029 | 103 (10.0) | 3 | 2 |
psbB | 1,500 | 137 (9.1) | 30 | 6 |
psbC | 1,359 | 143 (10.5) | 26 | 7 |
psbD | 1,074 | 90 (8.4) | 8 | 4 |
psbE | 234 | 17 (7.3) | 9 | 2 |
psbI | 108 | 16 (14.8) | 3 | 0 |
petB | 657 | 42 (6.4) | 23 | 3 |
petD | 477 | 25 (5.2) | 33 | 7 |
psaA | 2,022 | 153 (7.6) | 100 | 17 |
psaB | 2,094 | 194 (9.3) | 79 | 12 |
atpA | 1,434 | 143 (10.0) | 43 | 9 |
atpB | 1,971 | 197 (10.0) | 49 | 12 |
Mungpakdee et al. (2014).