TABLE 2.
Regions of Genomic Plasticity (RGPs) identified in the chromosome of IMP66, IMP67, and IMP68.
| Region | Coordinates | Length (kbp) | No. of CDSs | G + C% | Features | Best hit (% coverage,% identity)* |
| RGP1 | 290261–302956 | 12696 | 22 | 57.9 | tRNA | P. aeruginosa T63266 (100%, 100%) |
| RGP2 | 631096–652201 | 21106 | 35 | 57.8 | tRNA, transposase, integrase | P. aeruginosa PAER4_119 (44%, 94.1%) |
| RGP3 | 1730348–1738782 | 8435 | 15 | 56 | tRNA | P. aeruginosa T63266 (100%, 99.9%) |
| RGP4 | 1975456–1982437 | 6982 | 14 | 49.9 | unknown function | P. aeruginosa PAK (100%, 99.9%) |
| RGP5 | 2339727–2346716 | 6990 | 22 | 65.5 | tRNA | P. aeruginosa T63266 (100%, 100%) |
| RGP6 | 2366073–2406282 | 40210 | 64 | 63.5 | integrase, phage | P. aeruginosa F63912 (88%, 97.4%) |
| RGP7 | 2461950–2475724 | 13775 | 18 | 57.3 | tRNA, transposase | P. aeruginosa T63266 (100%, 100%) |
| RGP8 | 2798834–2807221 | 8388 | 28 | 49.5 | Transposase | P. aeruginosa T63266 (100%, 99.9%) |
| RGP9 | 2858761–2870683 | 11923 | 20 | 62.5 | transposase,type I-F CRISPR | P. aeruginosa PABL017 (100%, 94.6%) |
| RGP10 | 3122707–3171699 | 48993 | 56 | 61.9 | transposase, alkane hydrolase | P. aeruginosa T63266 (100%, 100%) |
| RGP11 | 4391909–4404142 | 12234 | 21 | 61.8 | Aromatic ring-hydroxylating dioxygenase subunit alpha, acetyltransferase | P. aeruginosa T63266 (100%, 100%) |
| RGP12 | 5104668–5141335 | 36668 | 65 | 64.5 | transposase, phage | P. aeruginosa JD024 (90%, 97.3%) |
| RGP13 | 5178764–5291282 | 112519 | 148 | 60.8 | tRNA, transposase, type II toxin-antitoxin system, integrating conjugative element protein, methyl-accepting chemotaxis protein | P. aeruginosa B136-33 (69%, 97.4%) |
| RGP14 | 6456744–6463635 | 6892 | 15 | 60 | cytochrome P450, isopenicillin N synthase family oxygenase | P. aeruginosa T63266 (100%, 100%) |
| SIGIVOM1 | 280000–283595 | 3596 | 11 | 60.4 | transposase | P. aeruginosa T63266 (100%, 100%) |
| SIGIVOM2 | 731236–769656 | 38421 | 62 | 58.9 | tRNA | P. aeruginosa SJTD-1 (100%, 99.8%) |
| SIGIVOM3 | 1287864–1292500 | 4637 | 13 | 58.2 | unknown function | P. aeruginosa M8A1 (100%, 99.7%) |
| SIGIVOM4 | 1869178–1874512 | 5335 | 16 | 47.3 | diguanylate phosphodiesterase | P. aeruginosa T63266 (100%, 100%) |
| SIGIVOM5 | 3479225–3484687 | 5463 | 14 | 45.5 | unknown function | P. aeruginosa T63266 (100%, 100%) |
| SIGIVOM6 | 4501618–4515000 | 13383 | 23 | 59.6 | tRNA, type 1 fimbrial protein | P. aeruginosa M8A1 (100%, 99.8%) |
| SIGIVOM7 | 4522500–4525211 | 2712 | 13 | 63.1 | unknow function | P. aeruginosa T63266 (100%, 100%) |
| SIGIVOM8 | 4669092–4686046 | 16955 | 39 | 57.9 | integrase, phage | P. aeruginosa T63266 (77%, 100%) |
| SIGIVOM9 | 5590764–5595000 | 4237 | 19 | 57.1 | phage | P. aeruginosa UCBPP-PA14 (67%, 97.8%) |
*BLASTN performed against the “nr” database at the NCBI website.