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. 2019 Nov 4;48(D1):D668–D675. doi: 10.1093/nar/gkz955

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© The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 3. — Visualization of in silico predicted transcription Factor binding sites based on SELEX-seq data at the Otx (KH.C4.84) locus in Ciona robusta. The top panel provides a global view of the organization of the locus, including exon positions, chormatin accessible regions, and TF-binding predictions. The bottom panel is an enlarged view of the Otx a-element (REG00000010), a short enhancer activated by ETS and GATA4/5/6 factors (35) through two ETS sites (blue boxes) and three GATA sites (green boxes). ‘Score’ indicated a continuous scoring of predicted affinity. ‘Summits’ associate the highest score of each peak to its summit base.