Table 3.
Counts of GtoPdb tagged ligands in PubChem (1 October 2019; data from GtoPdb 2019.4 release)
| Query | PubChem Substance query | SID counts |
|---|---|---|
| All ligands in GtoPdb | ‘IUPHAR/BPS Guide to PHARMACOLOGY’[SourceName] | 9806 |
| Approved drugs | AND gtopdb_approved | 1337 |
| Clinical antibodies | AND antibody | 258 |
| GtoImmuPdb | AND gtopdb_immuno | 964 |
| GtoMPdb | AND gtopdb_malaria | 72 |
| Query | PubChem Compound query | CID counts |
| All ligands in GtoPdb | ‘IUPHAR/BPS Guide to PHARMACOLOGY’[SourceName] | 7612 |
| Approved drugs | SID > CID | 1234 |
| GtoImmuPdb | SID > CID | 798 |
| GtoMPdb | SID > CID | 72 |
Apart from the total selected by source, all other CID numbers are retrieved via the ‘Find related data’ > Select PubChem Same Compound (i.e. a SID > CID conversion).