Table 2.
Comparison between CRISPRCasdb and previously established databases for CRISPR arrays and Cas
| Name | Date issue | Last update | Nbr Bacteria | Nbr Archaea | CRISPR detection | Cas detection | System type |
|---|---|---|---|---|---|---|---|
| CRISPRdb | 2007 | 2017/05/09 | 6782* | 232* | CRISPRFinder | no | no |
| CRISPI | 2009 | 2017/03/21 | 2644 | 168 | Pygram | BLAST | no |
| CRISPRBank | 2016 | 2571* | 162* | CRISPRDetect | GenBank annotation | yes | |
| CRISPRone | 2017 | 2018/08/01 | 32 288 | MetaCRT | HMM search | yes | |
| CRISPRminer | 2018 | 2017 | 43 140 | 167 | PILER-CR | HMM search | yes |
| CRISPRCasdb | 2018 | 2019/06/17 | 16 650* | 340* | CRISPRFinder | HMM search | yes |
*Complete genomes only.