Skip to main content
. 2019 Oct 29;48(D1):D789–D796. doi: 10.1093/nar/gkz942

Figure 2.

Figure 2.

A schematic workflow of the search interface in BBCancer. (A) BBCancer contains six types of RNAs (mRNA, lncRNA, circRNA, miRNA, piRNA and tRFRNA). (B) An interactive heat map showing the meta score of the gene expression fold change for each RNA type between tumor blood samples and normal blood samples from different studies for each cancer type (upper panel), and an interactive heat map showing the meta score of the gene expression rank for each RNA type in tumor and normal blood sample for each cancer type (lower panel). (C) Snapshot of the search results for ‘TIMP1’ using the ‘Protein coding’ search mode. Detailed information on the expression abundance of TIMP1 in all the colorectal cancer datasets is shown in the gene expression rank line graphs. (D) The expression of RNA in different studies of colorectal cancer compared to normal tissues. Click the ‘view’ button to obtain the boxplot representing the differential expression of RNAs between different conditions. (E) Interactive table for browsing the known blood biomarkers collected from Uttle et al (34).