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. 2020 Apr 10;15(4):e0231425. doi: 10.1371/journal.pone.0231425

Table 1. Genomic details of NAC TFs of plants.

NAC TFs have not undergone conditional duplication and none of a NAC TF gene has lost. In addition, transfer of NAC TFs was not observed from one species to another.

Sl. No Name of the species No. of double domain NAC TF No. of Novel chimeric NAC TFs Total No. of NAC TFs No. of duplicated genes No. of paralogous genes
Monocots
1 Aegilops tauschii 4 117 114 114
2 Brachypodium distachyon 2 1 137 135 135
3 Brachypodium stacei 1 1 128 127 127
4 Hordeum vulgare 76 76 76
5 Leersia perrieri 5 2 163 162 162
6 Oropetium thomaeum 1 118 103 103
7 Oryza barthii 4 134 138 138
8 Oryza brachyantha 1 1 118 110 110
9 Oryza glaberrima 1 116 110 110
10 Oryza glumipatula 2 140 139 139
11 Oryza longistaminata 1 6 125 98 98
12 Oryza meridionalis 2 2 127 123 123
13 Oryza nivara 4 1 146 130 130
14 Oryza punctata 6 1 135 133 133
15 Oryza rufipogon 4 3 136 129 129
16 Oryza sativa subsp. indica 1 3 157 156 156
17 Oryza sativa subsp. japonica 1 139 138 138
18 Panicum hallii 3 6 139 126 126
19 Panicum virgatum 9 6 310 309 309
20 Phoenix dactylifera 3 1 124 123 123
21 Phyllostachys edulis 125 124 124
22 Phyllostachys heterocycla 2 2 125 124 124
23 Saccharum officinarum 44 33 33
24 Setaria italica 4 139 134 134
25 Setaria viridis 1 135 118 118
26 Sorghum bicolor 1 141 134 134
27 Spirodela polyrhiza 55 48 48
28 Triticum aestivum 2 2 263 209 209
29 Triticum urartu 1 103 74 74
30 Zea mays 1 1 130 119 119
31 Zostera marina 1 62 55 55
32 Zoysia japonica 4 176 160 160
33 Zoysia matrella 1 3 313 230 230
34 Zoysia pacifica 1 2 205 183 183
Dicots
35 Actinidia chinensis 1 5 167 166 166
36 Aethionema arabicum 3 85 84 84
37 Amaranthus hypochondriacus 1 44 37 37
38 Amborella trichopoda 46 45 45
39 Ananas comosus 1 73 72 72
40 Aquilegia coerulea 80 79 79
41 Arabidopsis halleri 2 94 93 93
42 Arabidopsis lyrata 4 1 122 121 121
43 Arabidopsis thaliana 5 113 112 112
44 Arabis alpina 1 82 81 81
45 Arachis duranensis 82 81 81
46 Arachis hypogaea 162 161 161
47 Arachis ipaensis 83 81 81
48 Artemisia annua 28 27 27
49 Azadirachta indica 183 182 182
50 Beta vulgaris 53 52 52
51 Boechera stricta 2 123 122 122
52 Brassica napus 10 7 410 409 409
53 Brassica oleracea 4 3 271 270 270
54 Brassica rapa 4 2 256 255 255
55 Cajanus cajan 96 95 95
56 Camelina sativa 17 3 341 330 330
57 Cannabis sativa 58 57 57
58 Capsella grandiflora 2 95 94 94
59 Capsella rubella 5 119 118 118
60 Capsicum annum 96 95 95
61 Carica papaya 82 81 81
62 Castanea mollissima 4 91 78 78
63 Catharanthus roseus 2 121 120 120
64 Chenopodium quinoa 1 96 95 95
65 Cicer arietinum 96 95 95
66 Citrullus lanatus 80 79 79
67 Citrus clementina 129 128 128
68 Citrus sinensis 2 145 143 143
69 Coffea canephora 63 62 62
70 Cucumis melo 92 91 91
71 Cuccumis sativus 83 80 80
72 Daucus carota 2 96 95 95
73 Dianthus caryophyllus 79 77 77
74 Dichanthelium oligosanthes 8 2 131 100 100
75 Dorcoceras hygrometricum 2 83 76 76
76 Elaeis guineensis 2 1 170 167 167
77 Eragrostis tef 8 3 172 165 165
78 Eucalyptus camaldulensis 200 124 124
79 Eucalyptus grandis 164 150 150
80 Eutrema salsugineum 2 122 104 104
81 Fragaria vesca 3 6 127 123 123
82 Fragaria x ananassa 2 1 98 97 97
83 Genlisea aurea 1 45 42 42
84 Glycine max 180 175 175
85 Glycine soja 1 173 166 166
86 Gossypium arboreum 150 146 146
87 Gossypium hirsutum 1 2 306 296 296
88 Gossypium raimondii 153 145 145
89 Helianthus annuus 21 20 20
90 Humulus lupulus 74 68 68
91 Ipomoea trifida 1 2 131 123 123
92 Jatropha curcas 1 97 93 93
93 Juglans regia 3 92 81 81
94 Kalanchoe laxiflora 166 165 165
95 Kalanchoe marnieriana 179 178 178
96 Lactuca sativa 54 52 52
97 Linum usitatissimum 1 1 191 187 187
98 Lotus japonicus 2 98 92 92
99 Malus domestica 2 9 253 232 232
100 Manihot esculenta 130 128 128
101 Medicago truncatula 1 97 90 90
102 Mimulus guttatus 114 113 113
103 Morus notabilis 2 78 77 77
104 Musa acuminata 1 1 170 164 164
105 Nelumbo nucifera 88 79 79
106 Nicotiana benthamiana 2 2 227 185 185
107 Nicotiana sylvestris 156 149 149
108 Nicotiana tabacum 280 279 279
109 Nicotiana tomentosiformis 172 162 162
110 Ocimum tenuiflorum 2 1 110 82 82
111 Petunia axillaris 3 131 108 108
112 Petunia inflata 157 147 147
113 Phaseolus vulgaris 85 84 84
114 Populus euphratica 2 3 155 149 149
115 Populus trichocarpa 1 169 149 149
116 Prunus mume 1 129 128 128
117 Prunus persica 1 1 115 114 114
118 Pyrus bretschneideri 1 5 185 183 183
119 Raphanus raphanistrum 4 3 207 206 206
120 Raphanus sativus 5 1 217 197 197
121 Ricinus communis 95 87 87
122 Salix purpurea 175 152 152
123 Salvia miltiorrhiza 1 2 87 81 81
124 Sesamum indicum 105 104 104
125 Sisymbrium irio 2 2 121 118 118
126 Solanum lycopersicum 101 94 94
127 Solanum melongena 1 3 95 85 85
128 Solanum pennellii 2 102 98 98
129 Solanum pimpinellifolium 97 90 90
130 Solanum tuberosum 1 129 115 115
131 Spinacia oleracea 45 43 43
132 Tarenaya hassleriana 1 178 177 177
133 Thellungiella halophila 2 122 121 121
134 Thellungiella parvula 1 92 91 91
135 Theobroma cacao 132 131 131
136 Trifolium pratense 2 2 97 76 76
137 Utricularia gibba 1 74 73 73
138 Vigna angularis 98 97 97
139 Vigna radiata 2 82 81 81
140 Vigna unguiculata 20 19 19
141 Ziziphus jujuba 101 100 100
142 Vitis vinifera 1 70 79 79
Gymnosperms
143 Picea abies 1 100 73 73
144 Picea glauca 32 31 31
145 Picea sitchensis 16 15 15
146 Pinus taeda 31 27 27
147 Pseudotsuga menziesii 5 3 196 195 195
Pteridophyte
148 Selaginella moellendorffii 22 21 21
Bryophytes
149 Marchantia polymorpha 9
150 Physcomitrella patens 33 32 32
151 Sphagnum fallax 26 25 25
Algae
152 Bathycoccus prasinos 0 0 0
153 Chlamydomonas reinhardtii 0 0 0
154 Chlorella sp. NC64A 0 0 0
155 Coccomyxa sp. 0 0 0
156 Dunaliella salina 0 0 0
157 Klebsormidium flaccidum 3 0 0
158 Micromonas pusilla 0 0 0
159 Ostreococcus lucimarinus 0 0 0
160 Volvox carteri 0 0 0