TABLE 3.

Primers used for this study

Primer sequence (5′–3′)	Target
GCCTTGTCGCCATCTTTG	egfp-lmo2230-F integration
GGCCGTTTACATCTCCATC	egfp-lmo2230-R integration
ATAACGGCACAAGCTTCG	sigB-flank_F
TTATGGCGTCAACAGTCG	sigB-flank_R
GGAGTAAATGAACAAGGCAG	rsbX-flank_F
CGCTAGTTTAAAAGGTGTTATGG	rsbX-flank_R
CGGTCGACGTAGAGTCCATCGCCCGAA	rsbX-A
TTACTCCACTTCCTCATTCTGCAAC	rsbX-B
AATGAGGAAGTGGAGTAACCATAACACC	rsbX-C
CGAGATCTATCATTCCGGCAACAAGTAAATCTTGG	rsbX-D
CTAGCTAATGTTACGTTACA	pMAD-U
GCGAGAAGAATCATAATGGG	pMAD-L
GAAAATAAATTCCGGTTGCTAAGGC	lmo0596-A
AATCGAGTCGGATGGTTCTTGTT	lmo0596-B
CCACTCCTCTTTGATATGTATTTAT	lmo0596-flank_F
GGCAGATGAATGCACTTATG	lmo0596-flank_R
RT-qPCR
TGGGGAGCAAACAGGATTAG	16S_F
TAAGGTTCTTCGCGTTGCTT	16S_R
CATATTCGAAGTGCCATTGC	lmo2230_F
CTGAACTAGGTGAATAAGACAAAC	lmo2230_R
CCTAAACTTGGATTTCCGACTTATCTT	sreB_F
TTCTTATCACGAAAGGTGGAGGG	sreB_R
GGGTACTAGCTGACGGAATTTTATC	lmo0596_F
CCCACATACCGAAAAGTAATACGAG	lmo0596_R