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. 2020 Apr 10;10:6245. doi: 10.1038/s41598-020-63361-5

Figure 4.

Figure 4

Enrichment network for Oc- vs.St-PVAT comparison. The enrichment network shows the pathway/GO-BP gene-sets (nodes) that are significantly associated (FDR < 0.05) either with Oc- or St-PVAT. The node color refers to the association with the phenotype (Oc-PVAT, red; St-PVAT, blue); node gradient color is proportional to the gene-set normalized enrichment score (NES), from lower (light) to higher (dark); node size is proportional to the gene-set size. Edges connect related pathways/GO-BPs. Edge thickness is proportional to the similarity between two pathway/GO-BP, for a cut-off = 0.15 of the combined Jaccard plus Overlap coefficient. To simplify network reading, only relevant gene-sets are labeled with the name reported in Reactome or GO-BP gene-set collection. Enrichment network was drawn using the Enrichment Map software v.3.2.0, implemented as a plug-in in the Cytoscape v.3.7.0 platform.