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. 2017 Apr 7:151–172. doi: 10.1016/B978-0-12-803077-6.00009-6
Problem Possible Reason Suggested Solution
Lack of viable cells upon thawing Incorrect storage Obtain new stock stored in liquid nitrogen that have not been thawed
Incorrect thawing Thaw cells quickly but gradually, dilute frozen cells drop-wise with prewarmed medium, handle cells gently, and only centrifuge at low speeds
Glycerol exposure to light If the cryopreservative agent glycerol was used and exposed to light, its by-product acrolein may be toxic for the cells
Lack of cell attachment to culture vessel after subculturing Residual digestive enzyme activity Thoroughly wash cells in prewarmed medium before replating
Excessive digestion of cells Reduce digestion time and block enzymatic activity using inhibitor (FBS for Trypsin)
Mycoplasma contamination Perform routine Mycoplasma PCR tests on cultures
Slow cell growth Incorrect growth medium Growth medium must fit the requirements of the culture cell line and (if applicable) contain serum that has been screened
Depletion or breakdown of essential cell culture components Ensure presence of growth-promoting factors and substitute unstable components such as glutamine with GlutaMax
Incorrect storage of medium and supplements Follow manufacturer’s instructions closely
Passage number is too high The proliferation rate of cell cultures may cease with continuous subcultures—cells should be replaced with low-passage stocks
Confluency is too low Enhance concentration of initial plating density
Confluency is too high Cells should be passaged in their log-phase (at around ~80% confluency)
Mycoplasma contamination Perform routine Mycoplasma PCR tests on cultures
Rapid shift in medium pH Incorrect CO2 tension Adjust CO2 concentration of incubator based on HCO3 concentrations of medium: 2.0 g/L requires CO2 levels of 5%, while 3.7 g/L rely on 10% supplementary CO2
Lack of gas exchange Loosen caps of tissue culture flasks
Insufficient bicarbonate buffering in medium Add HEPES (10–25 mM)
Bacterial contamination Investigate cultures under light microscope
Cell death Lack of CO2 or fluctuating temperature Monitor CO2 and temperature levels of incubator and do not leave cells outside the incubator for extended periods of time
Accumulation of toxins Regularly replace cell culture medium
Incorrect osmotic pressure Review osmolality of cell culture medium and potential effects of added drug compounds or HEPES