TABLE 48.3.
A selection of DNA immobilization techniques on microarrays/chips (see Striebel et al., 2003)
Immobilization | Examples |
---|---|
Non-covalent complexation | Biotin-avidine/streptavidine |
Self assembled monolayer | Alkanethioles, mercapto- or epoxysilane-compounds |
Inclusion/crosslinking | NH2-dextrane matrix, aminoethylcellulose, polyacrylamide |
Polymerization | Co-polymerization of pyrrole and oligo-nucleotides with pyrrole residue at 5′-ends, pyrimidine pyrimidine-dimers, vinylsubstituted nucleotides |
Silanization by bifunctional reagents | Aminopropyltriethoxysilane (aminofunction with succinic anhydride convertible into carboxic acid function), 3-mercaptopropyl-triethoxysilane (disulfide bridge/thioether), glycidoxypropyltriethoxysilane, p-amino-phenyltrimethoxysilane (ATMS)/diazotation chemistry and unmodified oligonucleotides |
Covalently by linkerphotoactivated crosslinking | 3′-Hydroxyfunction, 5′phosphate residue, bromcyan, cyanurchloride, carboxylfunction, aldehyde, primary amine, DNA coupling by thymidines, DNA coupling via alkylamines, photolinkage (i.e., psoralen, p-nitrophenyl-3-diazopyruvate) |