Table 3.
Changes in the consensus sequences in samples collected from turkeys infected with A/turkey/Poland/14/2013(H9N2).
Turkeys | ||||
---|---|---|---|---|
Gene | Position | Amino Acid Change | No. of Birds with Frequency >50% at Any Day | |
Oropharyngeal Swabs | Cloacal Swabs | |||
PB2 | 303† | - | 1 | - |
467† | A156V | 1 | - | |
654† | - | 6 | 3 | |
735 | - | 5 | 2 | |
966† | - | 4 | 2 | |
1355 | E452V | - | 1 | |
1740 | - | - | 1 | |
2052† | - | 1 | - | |
PB1 | 560 | R187K | - | 1 |
623† | K208R | - | 1 | |
1911† | - | - | 1 | |
PA | 192 | - | 1 | - |
215 | L72S | 1 | - | |
1680 | - | 1 | - | |
HA | 73† | Y17H | 10 | 4 |
113† | I30T | 1 | 1 | |
285† | - | 9 | 3 | |
363† | - | 9 | 3 | |
433† | L133S | 9 | 3 | |
434† | L133R | 10 | 4 | |
1260† | - | 9 | 3 | |
1334† | T436I | 1 | 1 | |
NP | 687† | - | 1 | 1 |
1396 | L466I | - | 1 | |
NA | 84 | - | 1 | - |
540† | - | 1 | 1 | |
544 | G182S | 1 | - | |
702 | - | 1 | - | |
1114 | V372I | 1 | - | |
1156 | V386I | 1 | - | |
1203 | - | 5 | 2 | |
1218† | - | 1 | 1 | |
M | 699 | - | - | 1 |
† SNPs of inoculum origin |