Table 1.
Summary of Phenotype Causing Mutations in Human CYP26 genes.
| Gene | Nucleotide/AA Change | Change in Enzyme Function | Phenotype | Reference |
|---|---|---|---|---|
| CYP26A1 | R173S | ? | None reported | [206] |
| F186L | 40–80% reduced atRA metabolising activity in COS cells | |||
| C358R | ||||
| CYP26A1 | g.3116delT | reduced atRA metabolising activity | Associated with spina bifida | [208] |
| premature stop | ||||
| CYP26A1 | rs4411227 C/G or C/C | ? | Increased risk oral and pharyngeal cancer | [209,210,211] |
| CYP26A1 and CYP26C1 | Microdeletion of up to 249–363 kb of chrs. 10q23.33 | Haploinsufficiency | Optic nerve aplasia | [213] |
| CYP26A1, CYP26C1, EXOC6 | ||||
| CYP26A1 and CYP26C1 | 8.3 Mb microdel. Chrs 10q23.2–23.33. The 79 deleted genes included CYP26A1 and C1, | Haploinsufficiency CYP26A1, CYP26C1 + 79 other genes | Premature ageing skeletal and dental development, retinal scarring, and autism-spectrum | [214] |
| Raised plasma RA levels | ||||
| CYP26B1 | Nine missense or splicing changes | 100% loss of function | Neural tube, limb, craniofacial, skeletal, heart, kidney and lung defects | [207] |
| (samples collected during gestation) | ||||
| 583C > T Arg195Met (1) | ||||
| 589c > A Leu197Met (3) | ||||
| 704G > A Arg235Gln (1) | ||||
| 712C > G Gln238Glu (1) | ||||
| 715G > A Ala237Thr (3) | ||||
| CYP26B1 | Splicing variant with loss of exon 2 | 30% loss of function | Expressed in atherosclerotic lesion vascular cells | [215] |
| CYP26B1 | rs3768647/9309462 | ? | Increased risk oral and pharyngeal cancer | [209,210,211,212] |
| C/C or C/T | ||||
| rs138478634 G/A change in exon 5 | ||||
| CYP26B1 | rs2241057T/T (major allele | Lower CYP26B1 activity | Increased risk of Crohn’s disease | [217] |
| rs2241057C/C (minor allele) | Higher CYP26B1 activity | Larger macrophage-rich atherosclerotic | [216] | |
| L264S | lesions | |||
| CYP26B1 | 3 c.1088G > T | 100% loss of function by affecting the K-helix | Craniofacial, skull, pelvic, limb long bone skeletal defects | [202] |
| homozygous | ||||
| p.Arg363Leu | ||||
| 1 died in utero/2 terminations | ||||
| CYP26B1 | c.436T > C | 31% loss of function | Defects similar to Antley–Bixler and Pfeiffer Syndromes | [202] |
| homozygous | Skull, digit and joint skeletal defects | |||
| p.Ser146Pro | ||||
| Died at 5 months | ||||
| CYP26B1 | c.1303G > A | Predicted loss of function | Skull and long bone skeletal defects, intellectual disability | [218] |
| p.Gly435Ser | ||||
| homozygous | ||||
| (survived to adulthood) | ||||
| CYP26B1 | 0.78–4 Mb microdeletion 0.78–4 Mb chrs.2p13.2–13.3 | 8% induction of CYP26B1 mRNA by RA compared to controls | Intellectual disability, language delay, hyperactivity, dysmorphic facies and vertebral and/or craniofacial abnormalities | [219] |
| CYP26B1 and EXOC6B haploinsufficient | ||||
| CYP26C1 | Missense p.Phe508Cys | Loss of function | Confers increased severity of SHOX p.Val161Ala mutation skeletal and short stature phenotype | [223] |
| CYP26C1 | Missense c.148C > T, Pro50Ser; | Loss of function | Short stature phenotype | [224] |
| c.356A > C, p.Gln119Pro; c.910G > A, Ala304 The | ||||
| Splice variant truncation | ||||
| c.706-A > C | ||||
| CYP26C1 | Duplication > frameshift | 100% loss of function | Focal facial dermal dysplasia | [225] |
| > premature stop | ||||
| c.844–851dupCCATGCA | ||||
| p.Glu284fsX128 (maternal) | ||||
| homozygous and compound heterozygous | ||||
| Missense c.1433G > A p.Arg478His (paternal) | ||||
| compound heterozygous | ||||
| POR | Missense, nonsense, frameshift, splicing and exon deletions | Loss of function | Antley–Bixler like skeletal defects and deficient steroidal profiles | [220,221,222] |