Table 2.
Predicted variant impact on LOX protein conformation analyzed by PMUT, SIFT, and PolyPhen2 algorithms. Allelic frequencies are indicated.
|
| ||||
| Residue | PMUT | PolyPhen2 | SIFT | TGP frequency |
| R158Q | 0.11 | 0.000 | 0.21 | 0.157 (16%) |
| T392P | 0.68 | 0.087 | 0.02 | ND |
| TGP, 1000 Genome project; ND, not described | ||||